Gene : Glyma.03G150900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13829 - SNRNP CORE PROTEIN FAMILY MEMBER Genomic Order:  1509
Name:  ? Glyma.03G150900 Secondary Identifier:  ? PAC:30519329
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G150900 0.5kb upstream 0.5kb upstream 3144 true Chr03: 36584897-36588040 Glycine max
Glyma.03G150900 0.5kb upstream 0.5kb upstream 500 false Chr03: 36584897-36585396 Glycine max
Glyma.03G150900 0.5kb downstream 0.5kb downstream 3144 true Chr03: 36585397-36588540 Glycine max
Glyma.03G150900 0.5kb downstream 0.5kb downstream 500 false Chr03: 36588041-36588540 Glycine max
Glyma.03G150900 1.0kb upstream 1.0kb upstream 3644 true Chr03: 36584397-36588040 Glycine max
Glyma.03G150900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36584397-36585396 Glycine max
Glyma.03G150900 1.0kb downstream 1.0kb downstream 3644 true Chr03: 36585397-36589040 Glycine max
Glyma.03G150900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36588041-36589040 Glycine max
Glyma.03G150900 2.0kb upstream 2.0kb upstream 4644 true Chr03: 36583397-36588040 Glycine max
Glyma.03G150900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36583397-36585396 Glycine max
Glyma.03G150900 2.0kb downstream 2.0kb downstream 4644 true Chr03: 36585397-36590040 Glycine max
Glyma.03G150900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36588041-36590040 Glycine max
Glyma.03G150900 5.0kb upstream 5.0kb upstream 7644 true Chr03: 36580397-36588040 Glycine max
Glyma.03G150900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36580397-36585396 Glycine max
Glyma.03G150900 5.0kb downstream 5.0kb downstream 7644 true Chr03: 36585397-36593040 Glycine max
Glyma.03G150900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36588041-36593040 Glycine max
Glyma.03G150900 10.0kb upstream 10.0kb upstream 12644 true Chr03: 36575397-36588040 Glycine max
Glyma.03G150900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36575397-36585396 Glycine max
Glyma.03G150900 10.0kb downstream 10.0kb downstream 12644 true Chr03: 36585397-36598040 Glycine max
Glyma.03G150900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36588041-36598040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299509 5265 Fabidae View MSA
124061118 5270 Rosid View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.2054 0.0 92.2436 High  
cufflinks 36.7806 0.0 98.8575 High  
cufflinks 19.8312 0.0 55.4456   Low
cufflinks 36.7962 0.0 98.8609 High  
cufflinks 50.1555 0.0 133.834 High  
cufflinks 34.66 0.0 93.3619 High  
cufflinks 85.889 0.0 231.726 High High
cufflinks 32.3745 0.0 87.5098 High  
cufflinks 43.9 0.0 117.336 High  
cufflinks 5.721       Low
cufflinks 9.841     High High
cufflinks 6.413        
cufflinks 9.266     High  
cufflinks 10.821     High High
cufflinks 9.082     High  
cufflinks 6.896        
cufflinks 5.796       Low
cufflinks 7.78     High  
cufflinks 7.955     High  
cufflinks 7.122     High  
cufflinks 8.631     High  
cufflinks 7.249     High  
cufflinks 6.321       Low
cufflinks 10.663     High High
cufflinks 7.649     High  
cufflinks 7.898     High  

0 Strain