Gene : Glyma.19G103000 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2164 - Predicted E3 ubiquitin ligase Genomic Order:  1030
Name:  ? Glyma.19G103000 Secondary Identifier:  ? PAC:30512547
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G103000 0.5kb upstream 0.5kb upstream 8429 true Chr19: 35110690-35119118 Glycine max
Glyma.19G103000 0.5kb upstream 0.5kb upstream 500 false Chr19: 35118619-35119118 Glycine max
Glyma.19G103000 0.5kb downstream 0.5kb downstream 8429 true Chr19: 35110190-35118618 Glycine max
Glyma.19G103000 0.5kb downstream 0.5kb downstream 500 false Chr19: 35110190-35110689 Glycine max
Glyma.19G103000 1.0kb upstream 1.0kb upstream 8929 true Chr19: 35110690-35119618 Glycine max
Glyma.19G103000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35118619-35119618 Glycine max
Glyma.19G103000 1.0kb downstream 1.0kb downstream 8929 true Chr19: 35109690-35118618 Glycine max
Glyma.19G103000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35109690-35110689 Glycine max
Glyma.19G103000 2.0kb upstream 2.0kb upstream 9929 true Chr19: 35110690-35120618 Glycine max
Glyma.19G103000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35118619-35120618 Glycine max
Glyma.19G103000 2.0kb downstream 2.0kb downstream 9929 true Chr19: 35108690-35118618 Glycine max
Glyma.19G103000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35108690-35110689 Glycine max
Glyma.19G103000 5.0kb upstream 5.0kb upstream 12929 true Chr19: 35110690-35123618 Glycine max
Glyma.19G103000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35118619-35123618 Glycine max
Glyma.19G103000 5.0kb downstream 5.0kb downstream 12929 true Chr19: 35105690-35118618 Glycine max
Glyma.19G103000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35105690-35110689 Glycine max
Glyma.19G103000 10.0kb upstream 10.0kb upstream 17929 true Chr19: 35110690-35128618 Glycine max
Glyma.19G103000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35118619-35128618 Glycine max
Glyma.19G103000 10.0kb downstream 10.0kb downstream 17929 true Chr19: 35100690-35118618 Glycine max
Glyma.19G103000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35100690-35110689 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306700 5265 Fabidae View MSA
124060786 5270 Rosid View MSA
123742061 5271 Pentapetalae View MSA
122793495 5272 Eudicot View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0536 0.0 76.1306    
cufflinks 19.35 0.0 82.5741    
cufflinks 15.5954 0.0 65.1259    
cufflinks 20.9765 0.0 90.362 High  
cufflinks 14.7668 0.0 60.9312    
cufflinks 9.71441 0.0 36.144   Low
cufflinks 26.4729 0.0 118.454 High High
cufflinks 14.5426 0.0 59.9082    
cufflinks 12.5864 0.0 46.7266    
cufflinks 1.571        
cufflinks 1.674        
cufflinks 1.988        
cufflinks 1.664        
cufflinks 1.514        
cufflinks 1.726        
cufflinks 1.963        
cufflinks 1.38       Low
cufflinks 2.408       High
cufflinks 2.341       High
cufflinks 2.317       High
cufflinks 1.369       Low
cufflinks 2.267       High
cufflinks 1.671        
cufflinks 1.532        
cufflinks 2.025        
cufflinks 1.392       Low

0 Strain