Gene : Glyma.03G163100 G. max Wm82.a2.v1

Defline:  (1 of 3) PTHR10641//PTHR10641:SF523 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  1631
Name:  ? Glyma.03G163100 Secondary Identifier:  ? PAC:30515604

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G163100 0.5kb upstream 0.5kb upstream 2475 true Chr03: 37799544-37802018 Glycine max
Glyma.03G163100 0.5kb upstream 0.5kb upstream 500 false Chr03: 37799544-37800043 Glycine max
Glyma.03G163100 0.5kb downstream 0.5kb downstream 2475 true Chr03: 37800044-37802518 Glycine max
Glyma.03G163100 0.5kb downstream 0.5kb downstream 500 false Chr03: 37802019-37802518 Glycine max
Glyma.03G163100 1.0kb upstream 1.0kb upstream 2975 true Chr03: 37799044-37802018 Glycine max
Glyma.03G163100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37799044-37800043 Glycine max
Glyma.03G163100 1.0kb downstream 1.0kb downstream 2975 true Chr03: 37800044-37803018 Glycine max
Glyma.03G163100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37802019-37803018 Glycine max
Glyma.03G163100 2.0kb upstream 2.0kb upstream 3975 true Chr03: 37798044-37802018 Glycine max
Glyma.03G163100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37798044-37800043 Glycine max
Glyma.03G163100 2.0kb downstream 2.0kb downstream 3975 true Chr03: 37800044-37804018 Glycine max
Glyma.03G163100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37802019-37804018 Glycine max
Glyma.03G163100 5.0kb upstream 5.0kb upstream 6975 true Chr03: 37795044-37802018 Glycine max
Glyma.03G163100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37795044-37800043 Glycine max
Glyma.03G163100 5.0kb downstream 5.0kb downstream 6975 true Chr03: 37800044-37807018 Glycine max
Glyma.03G163100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37802019-37807018 Glycine max
Glyma.03G163100 10.0kb upstream 10.0kb upstream 11975 true Chr03: 37790044-37802018 Glycine max
Glyma.03G163100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37790044-37800043 Glycine max
Glyma.03G163100 10.0kb downstream 10.0kb downstream 11975 true Chr03: 37800044-37812018 Glycine max
Glyma.03G163100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37802019-37812018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310601 5265 Fabidae View MSA
124069462 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05984 0.0 3.8508    
cufflinks 0.191316 0.0 0.752671 Low  
cufflinks 0.110959 0.0 0.445084 Low  
cufflinks 0.0420436 0.0 0.178003 Low Low
cufflinks 0.450429 0.0 1.70728    
cufflinks 17.2282 0.0 46.5685   High
cufflinks 0.973322 0.0 3.55706    
cufflinks 0.246951 0.0 0.961211    
cufflinks 1.65155 0.0 5.8153    
cufflinks 0.806        
cufflinks 1.627        
cufflinks 0.285        
cufflinks 1.72        
cufflinks 0.391        
cufflinks 0.957        
cufflinks 0.181        
cufflinks 22.901     High High
cufflinks 0.057     Low Low
cufflinks 0.136        
cufflinks 0.027     Low Low
cufflinks 2.274        
cufflinks 0.161        
cufflinks 0.996        
cufflinks 4.943       High
cufflinks 0.059     Low Low
cufflinks 5.691       High

0 Strain