Gene : Glyma.19G106900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19919 - WD REPEAT CONTAINING PROTEIN Genomic Order:  1069
Name:  ? Glyma.19G106900 Secondary Identifier:  ? PAC:30513808
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G106900 0.5kb upstream 0.5kb upstream 3454 true Chr19: 35823585-35827038 Glycine max
Glyma.19G106900 0.5kb upstream 0.5kb upstream 500 false Chr19: 35826539-35827038 Glycine max
Glyma.19G106900 0.5kb downstream 0.5kb downstream 3454 true Chr19: 35823085-35826538 Glycine max
Glyma.19G106900 0.5kb downstream 0.5kb downstream 500 false Chr19: 35823085-35823584 Glycine max
Glyma.19G106900 1.0kb upstream 1.0kb upstream 3954 true Chr19: 35823585-35827538 Glycine max
Glyma.19G106900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 35826539-35827538 Glycine max
Glyma.19G106900 1.0kb downstream 1.0kb downstream 3954 true Chr19: 35822585-35826538 Glycine max
Glyma.19G106900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 35822585-35823584 Glycine max
Glyma.19G106900 2.0kb upstream 2.0kb upstream 4954 true Chr19: 35823585-35828538 Glycine max
Glyma.19G106900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 35826539-35828538 Glycine max
Glyma.19G106900 2.0kb downstream 2.0kb downstream 4954 true Chr19: 35821585-35826538 Glycine max
Glyma.19G106900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 35821585-35823584 Glycine max
Glyma.19G106900 5.0kb upstream 5.0kb upstream 7954 true Chr19: 35823585-35831538 Glycine max
Glyma.19G106900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 35826539-35831538 Glycine max
Glyma.19G106900 5.0kb downstream 5.0kb downstream 7954 true Chr19: 35818585-35826538 Glycine max
Glyma.19G106900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 35818585-35823584 Glycine max
Glyma.19G106900 10.0kb upstream 10.0kb upstream 12954 true Chr19: 35823585-35836538 Glycine max
Glyma.19G106900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 35826539-35836538 Glycine max
Glyma.19G106900 10.0kb downstream 10.0kb downstream 12954 true Chr19: 35813585-35826538 Glycine max
Glyma.19G106900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 35813585-35823584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306354 5265 Fabidae View MSA
124065960 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.372 0.0 30.3396   High
cufflinks 9.24196 0.0 24.7277    
cufflinks 8.03942 0.0 21.6186    
cufflinks 8.06768 0.0 21.6758    
cufflinks 10.204 0.0 27.2371   High
cufflinks 9.10408 0.0 24.3453    
cufflinks 6.28471 0.0 17.0826   Low
cufflinks 7.68163 0.0 20.6761    
cufflinks 7.41485 0.0 19.9726    
cufflinks 5.498        
cufflinks 3.944       Low
cufflinks 4.462       Low
cufflinks 5.422        
cufflinks 5.487        
cufflinks 5.489     High  
cufflinks 7.908     High High
cufflinks 4.719        
cufflinks 4.879        
cufflinks 8.949     High High
cufflinks 7.229     High  
cufflinks 4.188       Low
cufflinks 7.504     High High
cufflinks 7.389        
cufflinks 5.631        
cufflinks 8.023     High High
cufflinks 4.922        

0 Strain