Gene : Glyma.03G173600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24058:SF44 - SERINE/THREONINE-PROTEIN KINASE AFC1 Genomic Order:  1736
Name:  ? Glyma.03G173600 Secondary Identifier:  ? PAC:30516711
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G173600 0.5kb upstream 0.5kb upstream 5028 true Chr03: 38755869-38760896 Glycine max
Glyma.03G173600 0.5kb upstream 0.5kb upstream 500 false Chr03: 38755869-38756368 Glycine max
Glyma.03G173600 0.5kb downstream 0.5kb downstream 5028 true Chr03: 38756369-38761396 Glycine max
Glyma.03G173600 0.5kb downstream 0.5kb downstream 500 false Chr03: 38760897-38761396 Glycine max
Glyma.03G173600 1.0kb upstream 1.0kb upstream 5528 true Chr03: 38755369-38760896 Glycine max
Glyma.03G173600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38755369-38756368 Glycine max
Glyma.03G173600 1.0kb downstream 1.0kb downstream 5528 true Chr03: 38756369-38761896 Glycine max
Glyma.03G173600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38760897-38761896 Glycine max
Glyma.03G173600 2.0kb upstream 2.0kb upstream 6528 true Chr03: 38754369-38760896 Glycine max
Glyma.03G173600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38754369-38756368 Glycine max
Glyma.03G173600 2.0kb downstream 2.0kb downstream 6528 true Chr03: 38756369-38762896 Glycine max
Glyma.03G173600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38760897-38762896 Glycine max
Glyma.03G173600 5.0kb upstream 5.0kb upstream 9528 true Chr03: 38751369-38760896 Glycine max
Glyma.03G173600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38751369-38756368 Glycine max
Glyma.03G173600 5.0kb downstream 5.0kb downstream 9528 true Chr03: 38756369-38765896 Glycine max
Glyma.03G173600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38760897-38765896 Glycine max
Glyma.03G173600 10.0kb upstream 10.0kb upstream 14528 true Chr03: 38746369-38760896 Glycine max
Glyma.03G173600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38746369-38756368 Glycine max
Glyma.03G173600 10.0kb downstream 10.0kb downstream 14528 true Chr03: 38756369-38770896 Glycine max
Glyma.03G173600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38760897-38770896 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309487 5265 Fabidae View MSA
124063543 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.28243 0.0 17.6371    
cufflinks 5.57464 0.0 15.8486   Low
cufflinks 7.09339 0.0 19.6598    
cufflinks 7.11541 0.0 19.7251    
cufflinks 6.22058 0.0 17.4685    
cufflinks 8.55625 0.0 23.3749   High
cufflinks 7.99767 0.0 21.9929   High
cufflinks 6.33492 0.0 17.7367    
cufflinks 5.26943 0.0 15.0483   Low
cufflinks 2.684        
cufflinks 3.045        
cufflinks 2.923        
cufflinks 2.804        
cufflinks 2.27        
cufflinks 1.889       Low
cufflinks 4.818       High
cufflinks 1.982       Low
cufflinks 2.999        
cufflinks 3.429        
cufflinks 4.689       High
cufflinks 2.359        
cufflinks 4.124       High
cufflinks 2.946        
cufflinks 2.678        
cufflinks 4.298       High
cufflinks 2.728        

0 Strain