Gene : Glyma.03G171200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30509:SF9 - F3L24.34 PROTEIN Genomic Order:  1712
Name:  ? Glyma.03G171200 Secondary Identifier:  ? PAC:30519233
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G171200 0.5kb upstream 0.5kb upstream 6250 true Chr03: 38578774-38585023 Glycine max
Glyma.03G171200 0.5kb upstream 0.5kb upstream 500 false Chr03: 38578774-38579273 Glycine max
Glyma.03G171200 0.5kb downstream 0.5kb downstream 6250 true Chr03: 38579274-38585523 Glycine max
Glyma.03G171200 0.5kb downstream 0.5kb downstream 500 false Chr03: 38585024-38585523 Glycine max
Glyma.03G171200 1.0kb upstream 1.0kb upstream 6750 true Chr03: 38578274-38585023 Glycine max
Glyma.03G171200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38578274-38579273 Glycine max
Glyma.03G171200 1.0kb downstream 1.0kb downstream 6750 true Chr03: 38579274-38586023 Glycine max
Glyma.03G171200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38585024-38586023 Glycine max
Glyma.03G171200 2.0kb upstream 2.0kb upstream 7750 true Chr03: 38577274-38585023 Glycine max
Glyma.03G171200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38577274-38579273 Glycine max
Glyma.03G171200 2.0kb downstream 2.0kb downstream 7750 true Chr03: 38579274-38587023 Glycine max
Glyma.03G171200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38585024-38587023 Glycine max
Glyma.03G171200 5.0kb upstream 5.0kb upstream 10750 true Chr03: 38574274-38585023 Glycine max
Glyma.03G171200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38574274-38579273 Glycine max
Glyma.03G171200 5.0kb downstream 5.0kb downstream 10750 true Chr03: 38579274-38590023 Glycine max
Glyma.03G171200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38585024-38590023 Glycine max
Glyma.03G171200 10.0kb upstream 10.0kb upstream 15750 true Chr03: 38569274-38585023 Glycine max
Glyma.03G171200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38569274-38579273 Glycine max
Glyma.03G171200 10.0kb downstream 10.0kb downstream 15750 true Chr03: 38579274-38595023 Glycine max
Glyma.03G171200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38585024-38595023 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308305 5265 Fabidae View MSA
124069807 5270 Rosid View MSA
123743280 5271 Pentapetalae View MSA
122770592 5272 Eudicot View MSA
122049763 5273 Angiosperm View MSA
121311579 5274 Embryophyte View MSA
123426267 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.172065 0.0 0.851654 Low Low
cufflinks 0.369902 0.0 2.26353    
cufflinks 0.226821 0.0 1.10076    
cufflinks 0.162666 0.0 0.792008 Low Low
cufflinks 0.394738 0.0 1.77739    
cufflinks 0.398338 0.0 1.80347    
cufflinks 0.189655 0.0 0.940574 Low  
cufflinks 0.703762 0.0 3.78873   High
cufflinks 0.249544 0.0 1.62746 Low  
cufflinks 0.009     Low  
cufflinks 0.003     Low  
cufflinks 0.017     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.035     Low High
cufflinks 0.022     Low High
cufflinks 0.005     Low  
cufflinks 0.002     Low Low
cufflinks 0.004     Low  
cufflinks 0.006     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain