Gene : Glyma.03G122500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11654//PTHR11654:SF92 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  1225
Name:  ? Glyma.03G122500 Secondary Identifier:  ? PAC:30515729
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G122500 0.5kb upstream 0.5kb upstream 5578 true Chr03: 33543921-33549498 Glycine max
Glyma.03G122500 0.5kb upstream 0.5kb upstream 500 false Chr03: 33548999-33549498 Glycine max
Glyma.03G122500 0.5kb downstream 0.5kb downstream 5578 true Chr03: 33543421-33548998 Glycine max
Glyma.03G122500 0.5kb downstream 0.5kb downstream 500 false Chr03: 33543421-33543920 Glycine max
Glyma.03G122500 1.0kb upstream 1.0kb upstream 6078 true Chr03: 33543921-33549998 Glycine max
Glyma.03G122500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33548999-33549998 Glycine max
Glyma.03G122500 1.0kb downstream 1.0kb downstream 6078 true Chr03: 33542921-33548998 Glycine max
Glyma.03G122500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33542921-33543920 Glycine max
Glyma.03G122500 2.0kb upstream 2.0kb upstream 7078 true Chr03: 33543921-33550998 Glycine max
Glyma.03G122500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33548999-33550998 Glycine max
Glyma.03G122500 2.0kb downstream 2.0kb downstream 7078 true Chr03: 33541921-33548998 Glycine max
Glyma.03G122500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33541921-33543920 Glycine max
Glyma.03G122500 5.0kb upstream 5.0kb upstream 10078 true Chr03: 33543921-33553998 Glycine max
Glyma.03G122500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33548999-33553998 Glycine max
Glyma.03G122500 5.0kb downstream 5.0kb downstream 10078 true Chr03: 33538921-33548998 Glycine max
Glyma.03G122500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33538921-33543920 Glycine max
Glyma.03G122500 10.0kb upstream 10.0kb upstream 15078 true Chr03: 33543921-33558998 Glycine max
Glyma.03G122500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33548999-33558998 Glycine max
Glyma.03G122500 10.0kb downstream 10.0kb downstream 15078 true Chr03: 33533921-33548998 Glycine max
Glyma.03G122500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33533921-33543920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314269 5265 Fabidae View MSA
124070259 5270 Rosid View MSA
123749052 5271 Pentapetalae View MSA
122793607 5272 Eudicot View MSA
122044547 5273 Angiosperm View MSA
121351267 5274 Embryophyte View MSA
123382085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.8545 0.0 240.128 High High
cufflinks 8.73334 0.0 26.9857    
cufflinks 2.67412 0.0 8.37999   Low
cufflinks 3.04954 0.0 9.31233    
cufflinks 14.6325 0.0 43.4644    
cufflinks 10.9239 0.0 33.0534    
cufflinks 1.48219 0.0 5.48981   Low
cufflinks 18.9967 0.0 57.0512    
cufflinks 69.6103 0.0 210.347 High High
cufflinks 6.438        
cufflinks 0.247       Low
cufflinks 3.015        
cufflinks 13.637     High High
cufflinks 7.217     High  
cufflinks 7.19     High  
cufflinks 10.458     High  
cufflinks 1.524        
cufflinks 1.589        
cufflinks 3.057        
cufflinks 11.996     High  
cufflinks 0.633       Low
cufflinks 11.931     High  
cufflinks 9.729     High  
cufflinks 1.098        
cufflinks 10.317     High  
cufflinks 0.584       Low

0 Strain