Gene : Glyma.03G130000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR26402:SF507 - TWO-COMPONENT RESPONSE REGULATOR ARR8-RELATED Genomic Order:  1300
Name:  ? Glyma.03G130000 Secondary Identifier:  ? PAC:30515750
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G130000 0.5kb upstream 0.5kb upstream 2826 true Chr03: 34468143-34470968 Glycine max
Glyma.03G130000 0.5kb upstream 0.5kb upstream 500 false Chr03: 34470469-34470968 Glycine max
Glyma.03G130000 0.5kb downstream 0.5kb downstream 2826 true Chr03: 34467643-34470468 Glycine max
Glyma.03G130000 0.5kb downstream 0.5kb downstream 500 false Chr03: 34467643-34468142 Glycine max
Glyma.03G130000 1.0kb upstream 1.0kb upstream 3326 true Chr03: 34468143-34471468 Glycine max
Glyma.03G130000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34470469-34471468 Glycine max
Glyma.03G130000 1.0kb downstream 1.0kb downstream 3326 true Chr03: 34467143-34470468 Glycine max
Glyma.03G130000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34467143-34468142 Glycine max
Glyma.03G130000 2.0kb upstream 2.0kb upstream 4326 true Chr03: 34468143-34472468 Glycine max
Glyma.03G130000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34470469-34472468 Glycine max
Glyma.03G130000 2.0kb downstream 2.0kb downstream 4326 true Chr03: 34466143-34470468 Glycine max
Glyma.03G130000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34466143-34468142 Glycine max
Glyma.03G130000 5.0kb upstream 5.0kb upstream 7326 true Chr03: 34468143-34475468 Glycine max
Glyma.03G130000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34470469-34475468 Glycine max
Glyma.03G130000 5.0kb downstream 5.0kb downstream 7326 true Chr03: 34463143-34470468 Glycine max
Glyma.03G130000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34463143-34468142 Glycine max
Glyma.03G130000 10.0kb upstream 10.0kb upstream 12326 true Chr03: 34468143-34480468 Glycine max
Glyma.03G130000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34470469-34480468 Glycine max
Glyma.03G130000 10.0kb downstream 10.0kb downstream 12326 true Chr03: 34458143-34470468 Glycine max
Glyma.03G130000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34458143-34468142 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300085 5265 Fabidae View MSA
124073776 5270 Rosid View MSA
123749926 5271 Pentapetalae View MSA
122796134 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2452 0.0 30.8712    
cufflinks 16.8633 0.0 45.2418    
cufflinks 7.32909 0.0 20.9013   Low
cufflinks 20.5915 0.0 54.9756 High  
cufflinks 46.1704 0.0 125.89 High  
cufflinks 99.4761 0.0 296.465 High High
cufflinks 7.50873 0.0 21.4576   Low
cufflinks 30.5548 0.0 81.8813 High  
cufflinks 47.3275 0.0 129.574 High  
cufflinks 11.027     High  
cufflinks 7.017     High  
cufflinks 12.169     High  
cufflinks 61.447     High High
cufflinks 50.422     High High
cufflinks 51.375     High High
cufflinks 10.817     High  
cufflinks 4.263       Low
cufflinks 9.675     High  
cufflinks 13.236     High  
cufflinks 7.283     High  
cufflinks 8.8     High  
cufflinks 9.073     High  
cufflinks 13.31     High  
cufflinks 6.549     High  
cufflinks 8.794     High  
cufflinks 11.213     High  

0 Strain