Gene : Glyma.03G130600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Genomic Order:  1306
Name:  ? Glyma.03G130600 Secondary Identifier:  ? PAC:30516991
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G130600 0.5kb upstream 0.5kb upstream 2622 true Chr03: 34535554-34538175 Glycine max
Glyma.03G130600 0.5kb upstream 0.5kb upstream 500 false Chr03: 34535554-34536053 Glycine max
Glyma.03G130600 0.5kb downstream 0.5kb downstream 2622 true Chr03: 34536054-34538675 Glycine max
Glyma.03G130600 0.5kb downstream 0.5kb downstream 500 false Chr03: 34538176-34538675 Glycine max
Glyma.03G130600 1.0kb upstream 1.0kb upstream 3122 true Chr03: 34535054-34538175 Glycine max
Glyma.03G130600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34535054-34536053 Glycine max
Glyma.03G130600 1.0kb downstream 1.0kb downstream 3122 true Chr03: 34536054-34539175 Glycine max
Glyma.03G130600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34538176-34539175 Glycine max
Glyma.03G130600 2.0kb upstream 2.0kb upstream 4122 true Chr03: 34534054-34538175 Glycine max
Glyma.03G130600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34534054-34536053 Glycine max
Glyma.03G130600 2.0kb downstream 2.0kb downstream 4122 true Chr03: 34536054-34540175 Glycine max
Glyma.03G130600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34538176-34540175 Glycine max
Glyma.03G130600 5.0kb upstream 5.0kb upstream 7122 true Chr03: 34531054-34538175 Glycine max
Glyma.03G130600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34531054-34536053 Glycine max
Glyma.03G130600 5.0kb downstream 5.0kb downstream 7122 true Chr03: 34536054-34543175 Glycine max
Glyma.03G130600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34538176-34543175 Glycine max
Glyma.03G130600 10.0kb upstream 10.0kb upstream 12122 true Chr03: 34526054-34538175 Glycine max
Glyma.03G130600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34526054-34536053 Glycine max
Glyma.03G130600 10.0kb downstream 10.0kb downstream 12122 true Chr03: 34536054-34548175 Glycine max
Glyma.03G130600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34538176-34548175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311089 5265 Fabidae View MSA
124071325 5270 Rosid View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.244353 0.0 0.957705    
cufflinks 0.0122643 0.0 0.0589673 Low Low
cufflinks 10.1339 0.0 29.1189   High
cufflinks 0.130054 0.0 0.522097 Low  
cufflinks 0.103967 0.0 0.421733 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.95294 0.0 18.3283   High
cufflinks 0.007     Low Low
cufflinks 0.188        
cufflinks 0.021     Low Low
cufflinks 0.064     Low  
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.594       High
cufflinks 0.177        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.178        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.331        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.683       High

0 Strain