Gene : Glyma.03G134200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24093:SF296 - CALCIUM-TRANSPORTING ATPASE 4, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  1342
Name:  ? Glyma.03G134200 Secondary Identifier:  ? PAC:30516233
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G134200 0.5kb upstream 0.5kb upstream 13118 true Chr03: 34935414-34948531 Glycine max
Glyma.03G134200 0.5kb upstream 0.5kb upstream 500 false Chr03: 34948032-34948531 Glycine max
Glyma.03G134200 0.5kb downstream 0.5kb downstream 13118 true Chr03: 34934914-34948031 Glycine max
Glyma.03G134200 0.5kb downstream 0.5kb downstream 500 false Chr03: 34934914-34935413 Glycine max
Glyma.03G134200 1.0kb upstream 1.0kb upstream 13618 true Chr03: 34935414-34949031 Glycine max
Glyma.03G134200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34948032-34949031 Glycine max
Glyma.03G134200 1.0kb downstream 1.0kb downstream 13618 true Chr03: 34934414-34948031 Glycine max
Glyma.03G134200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34934414-34935413 Glycine max
Glyma.03G134200 2.0kb upstream 2.0kb upstream 14618 true Chr03: 34935414-34950031 Glycine max
Glyma.03G134200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34948032-34950031 Glycine max
Glyma.03G134200 2.0kb downstream 2.0kb downstream 14618 true Chr03: 34933414-34948031 Glycine max
Glyma.03G134200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34933414-34935413 Glycine max
Glyma.03G134200 5.0kb upstream 5.0kb upstream 17618 true Chr03: 34935414-34953031 Glycine max
Glyma.03G134200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34948032-34953031 Glycine max
Glyma.03G134200 5.0kb downstream 5.0kb downstream 17618 true Chr03: 34930414-34948031 Glycine max
Glyma.03G134200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34930414-34935413 Glycine max
Glyma.03G134200 10.0kb upstream 10.0kb upstream 22618 true Chr03: 34935414-34958031 Glycine max
Glyma.03G134200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34948032-34958031 Glycine max
Glyma.03G134200 10.0kb downstream 10.0kb downstream 22618 true Chr03: 34925414-34948031 Glycine max
Glyma.03G134200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34925414-34935413 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310149 5265 Fabidae View MSA
124070043 5270 Rosid View MSA
123738336 5271 Pentapetalae View MSA
122786540 5272 Eudicot View MSA
122043191 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.117 0.0 62.6518   High
cufflinks 9.73468 0.0 33.5241    
cufflinks 15.6043 0.0 56.4358   High
cufflinks 8.95297 0.0 26.8135    
cufflinks 7.65207 0.0 23.8874    
cufflinks 9.85982 0.0 33.9536    
cufflinks 8.97118 0.0 26.8049    
cufflinks 5.8461 0.0 20.2867   Low
cufflinks 8.18984 0.0 24.482    
cufflinks 1.202       Low
cufflinks 4.914       High
cufflinks 2.889        
cufflinks 1.57        
cufflinks 1.567        
cufflinks 4.399       High
cufflinks 1.118       Low
cufflinks 2.34        
cufflinks 2.695        
cufflinks 2.443        
cufflinks 1.186       Low
cufflinks 5.597       High
cufflinks 1.327        
cufflinks 1.387        
cufflinks 5.727       High
cufflinks 1.063       Low
cufflinks 3.649        

0 Strain