Gene : Glyma.03G142800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Genomic Order:  1428
Name:  ? Glyma.03G142800 Secondary Identifier:  ? PAC:30516771
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G142800 0.5kb upstream 0.5kb upstream 4902 true Chr03: 35863312-35868213 Glycine max
Glyma.03G142800 0.5kb upstream 0.5kb upstream 500 false Chr03: 35867714-35868213 Glycine max
Glyma.03G142800 0.5kb downstream 0.5kb downstream 4902 true Chr03: 35862812-35867713 Glycine max
Glyma.03G142800 0.5kb downstream 0.5kb downstream 500 false Chr03: 35862812-35863311 Glycine max
Glyma.03G142800 1.0kb upstream 1.0kb upstream 5402 true Chr03: 35863312-35868713 Glycine max
Glyma.03G142800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35867714-35868713 Glycine max
Glyma.03G142800 1.0kb downstream 1.0kb downstream 5402 true Chr03: 35862312-35867713 Glycine max
Glyma.03G142800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35862312-35863311 Glycine max
Glyma.03G142800 2.0kb upstream 2.0kb upstream 6402 true Chr03: 35863312-35869713 Glycine max
Glyma.03G142800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35867714-35869713 Glycine max
Glyma.03G142800 2.0kb downstream 2.0kb downstream 6402 true Chr03: 35861312-35867713 Glycine max
Glyma.03G142800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35861312-35863311 Glycine max
Glyma.03G142800 5.0kb upstream 5.0kb upstream 9402 true Chr03: 35863312-35872713 Glycine max
Glyma.03G142800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35867714-35872713 Glycine max
Glyma.03G142800 5.0kb downstream 5.0kb downstream 9402 true Chr03: 35858312-35867713 Glycine max
Glyma.03G142800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35858312-35863311 Glycine max
Glyma.03G142800 10.0kb upstream 10.0kb upstream 14402 true Chr03: 35863312-35877713 Glycine max
Glyma.03G142800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35867714-35877713 Glycine max
Glyma.03G142800 10.0kb downstream 10.0kb downstream 14402 true Chr03: 35853312-35867713 Glycine max
Glyma.03G142800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35853312-35863311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305196 5265 Fabidae View MSA
124067502 5270 Rosid View MSA
123738309 5271 Pentapetalae View MSA
122792566 5272 Eudicot View MSA
122046652 5273 Angiosperm View MSA
121347654 5274 Embryophyte View MSA
123380591 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8792 0.0 45.0736    
cufflinks 23.3329 0.0 76.6004 High High
cufflinks 3.65494 0.0 17.785    
cufflinks 9.84121 0.0 35.3287    
cufflinks 1.92591 0.0 10.7871    
cufflinks 1.3708 0.0 9.5231    
cufflinks 7.85845 0.0 31.5306    
cufflinks 10.2196 0.0 36.9707    
cufflinks 0.266099 0.0 2.35675   Low
cufflinks 3.862        
cufflinks 0.002     Low Low
cufflinks 1.332        
cufflinks 0.006     Low Low
cufflinks 0.013     Low  
cufflinks 0.002     Low Low
cufflinks 11.447     High  
cufflinks 0.002     Low Low
cufflinks 1.836        
cufflinks 3.672        
cufflinks 14.11     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.756     High  
cufflinks 9.829     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.275     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain