Gene : Glyma.03G084000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Genomic Order:  840
Name:  ? Glyma.03G084000 Secondary Identifier:  ? PAC:30518562
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G084000 0.5kb upstream 0.5kb upstream 4702 true Chr03: 23434413-23439114 Glycine max
Glyma.03G084000 0.5kb upstream 0.5kb upstream 500 false Chr03: 23434413-23434912 Glycine max
Glyma.03G084000 0.5kb downstream 0.5kb downstream 4702 true Chr03: 23434913-23439614 Glycine max
Glyma.03G084000 0.5kb downstream 0.5kb downstream 500 false Chr03: 23439115-23439614 Glycine max
Glyma.03G084000 1.0kb upstream 1.0kb upstream 5202 true Chr03: 23433913-23439114 Glycine max
Glyma.03G084000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 23433913-23434912 Glycine max
Glyma.03G084000 1.0kb downstream 1.0kb downstream 5202 true Chr03: 23434913-23440114 Glycine max
Glyma.03G084000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 23439115-23440114 Glycine max
Glyma.03G084000 2.0kb upstream 2.0kb upstream 6202 true Chr03: 23432913-23439114 Glycine max
Glyma.03G084000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 23432913-23434912 Glycine max
Glyma.03G084000 2.0kb downstream 2.0kb downstream 6202 true Chr03: 23434913-23441114 Glycine max
Glyma.03G084000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 23439115-23441114 Glycine max
Glyma.03G084000 5.0kb upstream 5.0kb upstream 9202 true Chr03: 23429913-23439114 Glycine max
Glyma.03G084000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 23429913-23434912 Glycine max
Glyma.03G084000 5.0kb downstream 5.0kb downstream 9202 true Chr03: 23434913-23444114 Glycine max
Glyma.03G084000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 23439115-23444114 Glycine max
Glyma.03G084000 10.0kb upstream 10.0kb upstream 14202 true Chr03: 23424913-23439114 Glycine max
Glyma.03G084000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 23424913-23434912 Glycine max
Glyma.03G084000 10.0kb downstream 10.0kb downstream 14202 true Chr03: 23434913-23449114 Glycine max
Glyma.03G084000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 23439115-23449114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.3257 0.0 95.8358 High High
cufflinks 8.36881 0.0 23.2071    
cufflinks 17.2316 0.0 46.011    
cufflinks 7.51703 0.0 21.0278    
cufflinks 12.5279 0.0 33.8027    
cufflinks 66.5693 0.0 192.303 High High
cufflinks 4.44671 0.0 13.3023   Low
cufflinks 9.57338 0.0 26.2472    
cufflinks 17.03 0.0 45.4934    
cufflinks 5.224        
cufflinks 34.057     High High
cufflinks 4.96        
cufflinks 6.154        
cufflinks 2.58       Low
cufflinks 23.175     High  
cufflinks 8.246     High  
cufflinks 23.346     High  
cufflinks 4.56       Low
cufflinks 5.298        
cufflinks 10.392     High  
cufflinks 33.289     High High
cufflinks 10.031     High  
cufflinks 8.175     High  
cufflinks 38.793     High High
cufflinks 8.501     High  
cufflinks 20.443     High  

0 Strain