Gene : Glyma.03G085900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31808:SF2 - F21O3.2 PROTEIN-RELATED Genomic Order:  859
Name:  ? Glyma.03G085900 Secondary Identifier:  ? PAC:30518165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G085900 0.5kb upstream 0.5kb upstream 5421 true Chr03: 25280967-25286387 Glycine max
Glyma.03G085900 0.5kb upstream 0.5kb upstream 500 false Chr03: 25285888-25286387 Glycine max
Glyma.03G085900 0.5kb downstream 0.5kb downstream 5421 true Chr03: 25280467-25285887 Glycine max
Glyma.03G085900 0.5kb downstream 0.5kb downstream 500 false Chr03: 25280467-25280966 Glycine max
Glyma.03G085900 1.0kb upstream 1.0kb upstream 5921 true Chr03: 25280967-25286887 Glycine max
Glyma.03G085900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25285888-25286887 Glycine max
Glyma.03G085900 1.0kb downstream 1.0kb downstream 5921 true Chr03: 25279967-25285887 Glycine max
Glyma.03G085900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25279967-25280966 Glycine max
Glyma.03G085900 2.0kb upstream 2.0kb upstream 6921 true Chr03: 25280967-25287887 Glycine max
Glyma.03G085900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25285888-25287887 Glycine max
Glyma.03G085900 2.0kb downstream 2.0kb downstream 6921 true Chr03: 25278967-25285887 Glycine max
Glyma.03G085900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25278967-25280966 Glycine max
Glyma.03G085900 5.0kb upstream 5.0kb upstream 9921 true Chr03: 25280967-25290887 Glycine max
Glyma.03G085900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25285888-25290887 Glycine max
Glyma.03G085900 5.0kb downstream 5.0kb downstream 9921 true Chr03: 25275967-25285887 Glycine max
Glyma.03G085900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25275967-25280966 Glycine max
Glyma.03G085900 10.0kb upstream 10.0kb upstream 14921 true Chr03: 25280967-25295887 Glycine max
Glyma.03G085900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25285888-25295887 Glycine max
Glyma.03G085900 10.0kb downstream 10.0kb downstream 14921 true Chr03: 25270967-25285887 Glycine max
Glyma.03G085900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25270967-25280966 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299816 5265 Fabidae View MSA
124063966 5270 Rosid View MSA
123742613 5271 Pentapetalae View MSA
122790300 5272 Eudicot View MSA
122047287 5273 Angiosperm View MSA
121310722 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.492 0.0 77.4522 High High
cufflinks 10.5482 0.0 37.38    
cufflinks 20.617 0.0 69.5323 High High
cufflinks 15.5385 0.0 53.1683    
cufflinks 5.01887 0.0 18.6494    
cufflinks 1.92196 0.0 7.21839   Low
cufflinks 7.62825 0.0 28.9423    
cufflinks 14.3597 0.0 49.1304    
cufflinks 6.35476 0.0 21.9149    
cufflinks 0.985        
cufflinks 1.1        
cufflinks 2.91        
cufflinks 0.254       Low
cufflinks 0.237       Low
cufflinks 0.582        
cufflinks 3.176        
cufflinks 0.369       Low
cufflinks 2.116        
cufflinks 1.977        
cufflinks 4.687       High
cufflinks 3.482        
cufflinks 3.71        
cufflinks 1.916        
cufflinks 1.04        
cufflinks 4.392       High
cufflinks 2.117        

0 Strain