Gene : Glyma.03G092800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31956:SF1 - NON-SPECIFIC PHOSPHOLIPASE C3-RELATED Genomic Order:  928
Name:  ? Glyma.03G092800 Secondary Identifier:  ? PAC:30515813
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G092800 0.5kb upstream 0.5kb upstream 5432 true Chr03: 27508753-27514184 Glycine max
Glyma.03G092800 0.5kb upstream 0.5kb upstream 500 false Chr03: 27513685-27514184 Glycine max
Glyma.03G092800 0.5kb downstream 0.5kb downstream 5432 true Chr03: 27508253-27513684 Glycine max
Glyma.03G092800 0.5kb downstream 0.5kb downstream 500 false Chr03: 27508253-27508752 Glycine max
Glyma.03G092800 1.0kb upstream 1.0kb upstream 5932 true Chr03: 27508753-27514684 Glycine max
Glyma.03G092800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27513685-27514684 Glycine max
Glyma.03G092800 1.0kb downstream 1.0kb downstream 5932 true Chr03: 27507753-27513684 Glycine max
Glyma.03G092800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27507753-27508752 Glycine max
Glyma.03G092800 2.0kb upstream 2.0kb upstream 6932 true Chr03: 27508753-27515684 Glycine max
Glyma.03G092800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27513685-27515684 Glycine max
Glyma.03G092800 2.0kb downstream 2.0kb downstream 6932 true Chr03: 27506753-27513684 Glycine max
Glyma.03G092800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27506753-27508752 Glycine max
Glyma.03G092800 5.0kb upstream 5.0kb upstream 9932 true Chr03: 27508753-27518684 Glycine max
Glyma.03G092800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27513685-27518684 Glycine max
Glyma.03G092800 5.0kb downstream 5.0kb downstream 9932 true Chr03: 27503753-27513684 Glycine max
Glyma.03G092800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27503753-27508752 Glycine max
Glyma.03G092800 10.0kb upstream 10.0kb upstream 14932 true Chr03: 27508753-27523684 Glycine max
Glyma.03G092800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27513685-27523684 Glycine max
Glyma.03G092800 10.0kb downstream 10.0kb downstream 14932 true Chr03: 27498753-27513684 Glycine max
Glyma.03G092800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27498753-27508752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309057 5265 Fabidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.355428 0.0 1.73947   Low
cufflinks 0.179661 0.0 0.89065 Low Low
cufflinks 40.4097 0.0 156.211 High High
cufflinks 4.5153 0.0 19.6946    
cufflinks 6.58435 0.0 26.298    
cufflinks 21.046 0.0 87.9742   High
cufflinks 0.282973 0.0 1.39478   Low
cufflinks 1.75388 0.0 6.3893    
cufflinks 5.59913 0.0 22.8641    
cufflinks 0.176        
cufflinks 0.473        
cufflinks 6.971       High
cufflinks 4.181       High
cufflinks 3.108       High
cufflinks 0.038     Low Low
cufflinks 0.08     Low  
cufflinks 0.436        
cufflinks 0.605        
cufflinks 0.043     Low Low
cufflinks 0.043     Low Low
cufflinks 0.497        
cufflinks 0.086     Low  
cufflinks 0.042     Low Low
cufflinks 1.112        
cufflinks 0.042     Low Low
cufflinks 0.871        

0 Strain