Gene : Glyma.04G083400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  834
Name:  ? Glyma.04G083400 Secondary Identifier:  ? PAC:30489244
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G083400 0.5kb upstream 0.5kb upstream 1364 true Chr04: 7035764-7037127 Glycine max
Glyma.04G083400 0.5kb upstream 0.5kb upstream 500 false Chr04: 7036628-7037127 Glycine max
Glyma.04G083400 0.5kb downstream 0.5kb downstream 1364 true Chr04: 7035264-7036627 Glycine max
Glyma.04G083400 0.5kb downstream 0.5kb downstream 500 false Chr04: 7035264-7035763 Glycine max
Glyma.04G083400 1.0kb upstream 1.0kb upstream 1864 true Chr04: 7035764-7037627 Glycine max
Glyma.04G083400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7036628-7037627 Glycine max
Glyma.04G083400 1.0kb downstream 1.0kb downstream 1864 true Chr04: 7034764-7036627 Glycine max
Glyma.04G083400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7034764-7035763 Glycine max
Glyma.04G083400 2.0kb upstream 2.0kb upstream 2864 true Chr04: 7035764-7038627 Glycine max
Glyma.04G083400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7036628-7038627 Glycine max
Glyma.04G083400 2.0kb downstream 2.0kb downstream 2864 true Chr04: 7033764-7036627 Glycine max
Glyma.04G083400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7033764-7035763 Glycine max
Glyma.04G083400 5.0kb upstream 5.0kb upstream 5864 true Chr04: 7035764-7041627 Glycine max
Glyma.04G083400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7036628-7041627 Glycine max
Glyma.04G083400 5.0kb downstream 5.0kb downstream 5864 true Chr04: 7030764-7036627 Glycine max
Glyma.04G083400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7030764-7035763 Glycine max
Glyma.04G083400 10.0kb upstream 10.0kb upstream 10864 true Chr04: 7035764-7046627 Glycine max
Glyma.04G083400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7036628-7046627 Glycine max
Glyma.04G083400 10.0kb downstream 10.0kb downstream 10864 true Chr04: 7025764-7036627 Glycine max
Glyma.04G083400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7025764-7035763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248923 5265 Fabidae Singleton cluster - no MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0243423 0.0 0.111833 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.02845 0.0 0.128679 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain