Gene : Glyma.04G096700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3117 - Protein involved in rRNA processing Genomic Order:  967
Name:  ? Glyma.04G096700 Secondary Identifier:  ? PAC:30487681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G096700 0.5kb upstream 0.5kb upstream 3942 true Chr04: 8743166-8747107 Glycine max
Glyma.04G096700 0.5kb upstream 0.5kb upstream 500 false Chr04: 8743166-8743665 Glycine max
Glyma.04G096700 0.5kb downstream 0.5kb downstream 3942 true Chr04: 8743666-8747607 Glycine max
Glyma.04G096700 0.5kb downstream 0.5kb downstream 500 false Chr04: 8747108-8747607 Glycine max
Glyma.04G096700 1.0kb upstream 1.0kb upstream 4442 true Chr04: 8742666-8747107 Glycine max
Glyma.04G096700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8742666-8743665 Glycine max
Glyma.04G096700 1.0kb downstream 1.0kb downstream 4442 true Chr04: 8743666-8748107 Glycine max
Glyma.04G096700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8747108-8748107 Glycine max
Glyma.04G096700 2.0kb upstream 2.0kb upstream 5442 true Chr04: 8741666-8747107 Glycine max
Glyma.04G096700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8741666-8743665 Glycine max
Glyma.04G096700 2.0kb downstream 2.0kb downstream 5442 true Chr04: 8743666-8749107 Glycine max
Glyma.04G096700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8747108-8749107 Glycine max
Glyma.04G096700 5.0kb upstream 5.0kb upstream 8442 true Chr04: 8738666-8747107 Glycine max
Glyma.04G096700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8738666-8743665 Glycine max
Glyma.04G096700 5.0kb downstream 5.0kb downstream 8442 true Chr04: 8743666-8752107 Glycine max
Glyma.04G096700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8747108-8752107 Glycine max
Glyma.04G096700 10.0kb upstream 10.0kb upstream 13442 true Chr04: 8733666-8747107 Glycine max
Glyma.04G096700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8733666-8743665 Glycine max
Glyma.04G096700 10.0kb downstream 10.0kb downstream 13442 true Chr04: 8743666-8757107 Glycine max
Glyma.04G096700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8747108-8757107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300651 5265 Fabidae View MSA
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49521 0.0 23.2092    
cufflinks 7.21339 0.0 27.7057   High
cufflinks 4.54619 0.0 16.9874   Low
cufflinks 6.97659 0.0 26.9614    
cufflinks 6.38008 0.0 25.5566    
cufflinks 6.73581 0.0 22.754    
cufflinks 6.64872 0.0 22.6897    
cufflinks 6.32175 0.0 25.1224    
cufflinks 5.38182 0.0 19.2578    
cufflinks 1.236        
cufflinks 1.081        
cufflinks 1.664        
cufflinks 2.075       High
cufflinks 2.49       High
cufflinks 0.883       Low
cufflinks 1.05        
cufflinks 0.992        
cufflinks 1.643        
cufflinks 1.758       High
cufflinks 1.084        
cufflinks 1.04        
cufflinks 1.023        
cufflinks 1.524        
cufflinks 1.014        
cufflinks 0.951        
cufflinks 1.04        

0 Strain