Gene : Glyma.04G100700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10108:SF899 - PECTIN METHYLTRANSFERASE QUA2-RELATED Genomic Order:  1007
Name:  ? Glyma.04G100700 Secondary Identifier:  ? PAC:30490870
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G100700 0.5kb upstream 0.5kb upstream 8838 true Chr04: 9267032-9275869 Glycine max
Glyma.04G100700 0.5kb upstream 0.5kb upstream 500 false Chr04: 9267032-9267531 Glycine max
Glyma.04G100700 0.5kb downstream 0.5kb downstream 8838 true Chr04: 9267532-9276369 Glycine max
Glyma.04G100700 0.5kb downstream 0.5kb downstream 500 false Chr04: 9275870-9276369 Glycine max
Glyma.04G100700 1.0kb upstream 1.0kb upstream 9338 true Chr04: 9266532-9275869 Glycine max
Glyma.04G100700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9266532-9267531 Glycine max
Glyma.04G100700 1.0kb downstream 1.0kb downstream 9338 true Chr04: 9267532-9276869 Glycine max
Glyma.04G100700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9275870-9276869 Glycine max
Glyma.04G100700 2.0kb upstream 2.0kb upstream 10338 true Chr04: 9265532-9275869 Glycine max
Glyma.04G100700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9265532-9267531 Glycine max
Glyma.04G100700 2.0kb downstream 2.0kb downstream 10338 true Chr04: 9267532-9277869 Glycine max
Glyma.04G100700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9275870-9277869 Glycine max
Glyma.04G100700 5.0kb upstream 5.0kb upstream 13338 true Chr04: 9262532-9275869 Glycine max
Glyma.04G100700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9262532-9267531 Glycine max
Glyma.04G100700 5.0kb downstream 5.0kb downstream 13338 true Chr04: 9267532-9280869 Glycine max
Glyma.04G100700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9275870-9280869 Glycine max
Glyma.04G100700 10.0kb upstream 10.0kb upstream 18338 true Chr04: 9257532-9275869 Glycine max
Glyma.04G100700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9257532-9267531 Glycine max
Glyma.04G100700 10.0kb downstream 10.0kb downstream 18338 true Chr04: 9267532-9285869 Glycine max
Glyma.04G100700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9275870-9285869 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309975 5265 Fabidae View MSA
124068394 5270 Rosid View MSA
123753010 5271 Pentapetalae View MSA
122796119 5272 Eudicot View MSA
122048389 5273 Angiosperm View MSA
121346192 5274 Embryophyte View MSA
123380346 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.02106 0.0 19.4204    
cufflinks 4.6357 0.0 15.5945    
cufflinks 3.13326 0.0 10.8313    
cufflinks 9.44784 0.0 29.8591    
cufflinks 6.6737 0.0 21.5578    
cufflinks 9.46494 0.0 28.6539    
cufflinks 1.58122 0.0 6.91141   Low
cufflinks 7.73559 0.0 27.0204    
cufflinks 5.6842 0.0 18.4876    
cufflinks 3.38       High
cufflinks 0.229       Low
cufflinks 1.154        
cufflinks 2.274       High
cufflinks 2.747       High
cufflinks 0.122       Low
cufflinks 0.871        
cufflinks 0.686        
cufflinks 2.414       High
cufflinks 1.652        
cufflinks 0.766        
cufflinks 0.312       Low
cufflinks 1.074        
cufflinks 0.894        
cufflinks 0.29       Low
cufflinks 0.77        
cufflinks 0.445        

0 Strain