Gene : Glyma.04G105000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11649:SF56 - TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL Genomic Order:  1050
Name:  ? Glyma.04G105000 Secondary Identifier:  ? PAC:30487896
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G105000 0.5kb upstream 0.5kb upstream 4397 true Chr04: 10071384-10075780 Glycine max
Glyma.04G105000 0.5kb upstream 0.5kb upstream 500 false Chr04: 10075281-10075780 Glycine max
Glyma.04G105000 0.5kb downstream 0.5kb downstream 4397 true Chr04: 10070884-10075280 Glycine max
Glyma.04G105000 0.5kb downstream 0.5kb downstream 500 false Chr04: 10070884-10071383 Glycine max
Glyma.04G105000 1.0kb upstream 1.0kb upstream 4897 true Chr04: 10071384-10076280 Glycine max
Glyma.04G105000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10075281-10076280 Glycine max
Glyma.04G105000 1.0kb downstream 1.0kb downstream 4897 true Chr04: 10070384-10075280 Glycine max
Glyma.04G105000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10070384-10071383 Glycine max
Glyma.04G105000 2.0kb upstream 2.0kb upstream 5897 true Chr04: 10071384-10077280 Glycine max
Glyma.04G105000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10075281-10077280 Glycine max
Glyma.04G105000 2.0kb downstream 2.0kb downstream 5897 true Chr04: 10069384-10075280 Glycine max
Glyma.04G105000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10069384-10071383 Glycine max
Glyma.04G105000 5.0kb upstream 5.0kb upstream 8897 true Chr04: 10071384-10080280 Glycine max
Glyma.04G105000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10075281-10080280 Glycine max
Glyma.04G105000 5.0kb downstream 5.0kb downstream 8897 true Chr04: 10066384-10075280 Glycine max
Glyma.04G105000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10066384-10071383 Glycine max
Glyma.04G105000 10.0kb upstream 10.0kb upstream 13897 true Chr04: 10071384-10085280 Glycine max
Glyma.04G105000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10075281-10085280 Glycine max
Glyma.04G105000 10.0kb downstream 10.0kb downstream 13897 true Chr04: 10061384-10075280 Glycine max
Glyma.04G105000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10061384-10071383 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310482 5265 Fabidae View MSA
124062172 5270 Rosid View MSA
123739565 5271 Pentapetalae View MSA
122791860 5272 Eudicot View MSA
122042865 5273 Angiosperm View MSA
121344741 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.09061 0.0 18.7259   High
cufflinks 2.06572 0.0 11.7046    
cufflinks 3.07318 0.0 15.2547    
cufflinks 2.48064 0.0 13.4584    
cufflinks 1.75379 0.0 10.3071    
cufflinks 1.28635 0.0 7.76067   Low
cufflinks 1.70865 0.0 10.4036    
cufflinks 2.41523 0.0 12.9276    
cufflinks 2.00813 0.0 11.5658    
cufflinks 0.257        
cufflinks 0.442        
cufflinks 0.375        
cufflinks 0.203       Low
cufflinks 0.239       Low
cufflinks 0.783       High
cufflinks 0.711       High
cufflinks 0.16       Low
cufflinks 0.355        
cufflinks 0.392        
cufflinks 0.662       High
cufflinks 0.43        
cufflinks 0.752       High
cufflinks 0.598        
cufflinks 0.337        
cufflinks 0.641        
cufflinks 0.281        

0 Strain