Gene : Glyma.04G117400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11804:SF5 - MITOCHONDRIAL INTERMEDIATE PEPTIDASE Genomic Order:  1174
Name:  ? Glyma.04G117400 Secondary Identifier:  ? PAC:30490329
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G117400 0.5kb upstream 0.5kb upstream 48320 true Chr04: 13774897-13823216 Glycine max
Glyma.04G117400 0.5kb upstream 0.5kb upstream 500 false Chr04: 13822717-13823216 Glycine max
Glyma.04G117400 0.5kb downstream 0.5kb downstream 48320 true Chr04: 13774397-13822716 Glycine max
Glyma.04G117400 0.5kb downstream 0.5kb downstream 500 false Chr04: 13774397-13774896 Glycine max
Glyma.04G117400 1.0kb upstream 1.0kb upstream 48820 true Chr04: 13774897-13823716 Glycine max
Glyma.04G117400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13822717-13823716 Glycine max
Glyma.04G117400 1.0kb downstream 1.0kb downstream 48820 true Chr04: 13773897-13822716 Glycine max
Glyma.04G117400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13773897-13774896 Glycine max
Glyma.04G117400 2.0kb upstream 2.0kb upstream 49820 true Chr04: 13774897-13824716 Glycine max
Glyma.04G117400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13822717-13824716 Glycine max
Glyma.04G117400 2.0kb downstream 2.0kb downstream 49820 true Chr04: 13772897-13822716 Glycine max
Glyma.04G117400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13772897-13774896 Glycine max
Glyma.04G117400 5.0kb upstream 5.0kb upstream 52820 true Chr04: 13774897-13827716 Glycine max
Glyma.04G117400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13822717-13827716 Glycine max
Glyma.04G117400 5.0kb downstream 5.0kb downstream 52820 true Chr04: 13769897-13822716 Glycine max
Glyma.04G117400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13769897-13774896 Glycine max
Glyma.04G117400 10.0kb upstream 10.0kb upstream 57820 true Chr04: 13774897-13832716 Glycine max
Glyma.04G117400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13822717-13832716 Glycine max
Glyma.04G117400 10.0kb downstream 10.0kb downstream 57820 true Chr04: 13764897-13822716 Glycine max
Glyma.04G117400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13764897-13774896 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301092 5265 Fabidae View MSA
124071882 5270 Rosid View MSA
123740911 5271 Pentapetalae View MSA
122790063 5272 Eudicot View MSA
122047450 5273 Angiosperm View MSA
121347526 5274 Embryophyte View MSA
123424880 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83644 0.0 19.3809    
cufflinks 3.08517 0.0 18.5536    
cufflinks 2.94015 0.0 14.8851    
cufflinks 2.10386 0.0 9.34972   Low
cufflinks 4.17461 0.0 18.9409   High
cufflinks 2.4695 0.0 13.4024    
cufflinks 2.75447 0.0 15.8684    
cufflinks 2.50637 0.0 7.62787    
cufflinks 3.10968 0.0 11.7451    
cufflinks 0.036     Low  
cufflinks 0.014     Low Low
cufflinks 0.04     Low  
cufflinks 0.064     Low High
cufflinks 0.089       High
cufflinks 0.04     Low  
cufflinks 0.034     Low  
cufflinks 0.025     Low  
cufflinks 0.051     Low  
cufflinks 0.054     Low  
cufflinks 0.03     Low  
cufflinks 0.018     Low Low
cufflinks 0.032     Low  
cufflinks 0.047     Low  
cufflinks 0.013     Low Low
cufflinks 0.037     Low  
cufflinks 0.03     Low  

0 Strain