Gene : Glyma.04G116700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10130 - PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 Genomic Order:  1167
Name:  ? Glyma.04G116700 Secondary Identifier:  ? PAC:30487762
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G116700 0.5kb upstream 0.5kb upstream 25941 true Chr04: 13563836-13589776 Glycine max
Glyma.04G116700 0.5kb upstream 0.5kb upstream 500 false Chr04: 13563836-13564335 Glycine max
Glyma.04G116700 0.5kb downstream 0.5kb downstream 25941 true Chr04: 13564336-13590276 Glycine max
Glyma.04G116700 0.5kb downstream 0.5kb downstream 500 false Chr04: 13589777-13590276 Glycine max
Glyma.04G116700 1.0kb upstream 1.0kb upstream 26441 true Chr04: 13563336-13589776 Glycine max
Glyma.04G116700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13563336-13564335 Glycine max
Glyma.04G116700 1.0kb downstream 1.0kb downstream 26441 true Chr04: 13564336-13590776 Glycine max
Glyma.04G116700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13589777-13590776 Glycine max
Glyma.04G116700 2.0kb upstream 2.0kb upstream 27441 true Chr04: 13562336-13589776 Glycine max
Glyma.04G116700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13562336-13564335 Glycine max
Glyma.04G116700 2.0kb downstream 2.0kb downstream 27441 true Chr04: 13564336-13591776 Glycine max
Glyma.04G116700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13589777-13591776 Glycine max
Glyma.04G116700 5.0kb upstream 5.0kb upstream 30441 true Chr04: 13559336-13589776 Glycine max
Glyma.04G116700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13559336-13564335 Glycine max
Glyma.04G116700 5.0kb downstream 5.0kb downstream 30441 true Chr04: 13564336-13594776 Glycine max
Glyma.04G116700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13589777-13594776 Glycine max
Glyma.04G116700 10.0kb upstream 10.0kb upstream 35441 true Chr04: 13554336-13589776 Glycine max
Glyma.04G116700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13554336-13564335 Glycine max
Glyma.04G116700 10.0kb downstream 10.0kb downstream 35441 true Chr04: 13564336-13599776 Glycine max
Glyma.04G116700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13589777-13599776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043170 5273 Angiosperm View MSA
122302630 5265 Fabidae View MSA
124068433 5270 Rosid View MSA
123738284 5271 Pentapetalae View MSA
122789462 5272 Eudicot View MSA
121345209 5274 Embryophyte View MSA
123423857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6131 0.0 82.0198   High
cufflinks 6.71391 0.0 25.9999    
cufflinks 15.7976 0.0 54.2994    
cufflinks 11.606 0.0 43.7254    
cufflinks 8.94358 0.0 30.2243    
cufflinks 3.09817 0.0 14.2077   Low
cufflinks 13.548 0.0 55.8216    
cufflinks 7.73618 0.0 26.4421    
cufflinks 11.0571 0.0 45.5334    
cufflinks 0.133       Low
cufflinks 0.614       High
cufflinks 0.322        
cufflinks 0.136       Low
cufflinks 0.14       Low
cufflinks 0.646       High
cufflinks 0.257        
cufflinks 0.153       Low
cufflinks 0.284        
cufflinks 0.211        
cufflinks 0.354        
cufflinks 0.407        
cufflinks 0.297        
cufflinks 0.198        
cufflinks 0.4        
cufflinks 0.309        
cufflinks 0.22        

0 Strain