Gene : Glyma.04G112500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  1125
Name:  ? Glyma.04G112500 Secondary Identifier:  ? PAC:30489603
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G112500 0.5kb upstream 0.5kb upstream 2915 true Chr04: 12607067-12609981 Glycine max
Glyma.04G112500 0.5kb upstream 0.5kb upstream 500 false Chr04: 12607067-12607566 Glycine max
Glyma.04G112500 0.5kb downstream 0.5kb downstream 2915 true Chr04: 12607567-12610481 Glycine max
Glyma.04G112500 0.5kb downstream 0.5kb downstream 500 false Chr04: 12609982-12610481 Glycine max
Glyma.04G112500 1.0kb upstream 1.0kb upstream 3415 true Chr04: 12606567-12609981 Glycine max
Glyma.04G112500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12606567-12607566 Glycine max
Glyma.04G112500 1.0kb downstream 1.0kb downstream 3415 true Chr04: 12607567-12610981 Glycine max
Glyma.04G112500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12609982-12610981 Glycine max
Glyma.04G112500 2.0kb upstream 2.0kb upstream 4415 true Chr04: 12605567-12609981 Glycine max
Glyma.04G112500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12605567-12607566 Glycine max
Glyma.04G112500 2.0kb downstream 2.0kb downstream 4415 true Chr04: 12607567-12611981 Glycine max
Glyma.04G112500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12609982-12611981 Glycine max
Glyma.04G112500 5.0kb upstream 5.0kb upstream 7415 true Chr04: 12602567-12609981 Glycine max
Glyma.04G112500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12602567-12607566 Glycine max
Glyma.04G112500 5.0kb downstream 5.0kb downstream 7415 true Chr04: 12607567-12614981 Glycine max
Glyma.04G112500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12609982-12614981 Glycine max
Glyma.04G112500 10.0kb upstream 10.0kb upstream 12415 true Chr04: 12597567-12609981 Glycine max
Glyma.04G112500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12597567-12607566 Glycine max
Glyma.04G112500 10.0kb downstream 10.0kb downstream 12415 true Chr04: 12607567-12619981 Glycine max
Glyma.04G112500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12609982-12619981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309785 5265 Fabidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8444 0.0 54.7559    
cufflinks 16.823 0.0 68.6918    
cufflinks 16.0954 0.0 64.7594    
cufflinks 16.7903 0.0 66.007    
cufflinks 42.792 0.0 150.589 High  
cufflinks 297.286 0.0 1457.57 High High
cufflinks 19.4172 0.0 74.2894    
cufflinks 70.7411 0.0 257.859 High  
cufflinks 24.5007 0.0 93.3947 High  
cufflinks 21.18     High High
cufflinks 7.345     High  
cufflinks 3.679        
cufflinks 8.96     High  
cufflinks 7.192     High  
cufflinks 10.068     High  
cufflinks 3.277        
cufflinks 27.531     High High
cufflinks 4.674        
cufflinks 2.169       Low
cufflinks 2.216       Low
cufflinks 6.301     High  
cufflinks 2.533       Low
cufflinks 3.452        
cufflinks 3.942        
cufflinks 2.62        
cufflinks 13.378     High High

0 Strain