Gene : Glyma.04G112600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11937:SF161 - ACTIN-RELATED PROTEIN 8 Genomic Order:  1126
Name:  ? Glyma.04G112600 Secondary Identifier:  ? PAC:30487865
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G112600 0.5kb upstream 0.5kb upstream 10417 true Chr04: 12610633-12621049 Glycine max
Glyma.04G112600 0.5kb upstream 0.5kb upstream 500 false Chr04: 12620550-12621049 Glycine max
Glyma.04G112600 0.5kb downstream 0.5kb downstream 10417 true Chr04: 12610133-12620549 Glycine max
Glyma.04G112600 0.5kb downstream 0.5kb downstream 500 false Chr04: 12610133-12610632 Glycine max
Glyma.04G112600 1.0kb upstream 1.0kb upstream 10917 true Chr04: 12610633-12621549 Glycine max
Glyma.04G112600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12620550-12621549 Glycine max
Glyma.04G112600 1.0kb downstream 1.0kb downstream 10917 true Chr04: 12609633-12620549 Glycine max
Glyma.04G112600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12609633-12610632 Glycine max
Glyma.04G112600 2.0kb upstream 2.0kb upstream 11917 true Chr04: 12610633-12622549 Glycine max
Glyma.04G112600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12620550-12622549 Glycine max
Glyma.04G112600 2.0kb downstream 2.0kb downstream 11917 true Chr04: 12608633-12620549 Glycine max
Glyma.04G112600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12608633-12610632 Glycine max
Glyma.04G112600 5.0kb upstream 5.0kb upstream 14917 true Chr04: 12610633-12625549 Glycine max
Glyma.04G112600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12620550-12625549 Glycine max
Glyma.04G112600 5.0kb downstream 5.0kb downstream 14917 true Chr04: 12605633-12620549 Glycine max
Glyma.04G112600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12605633-12610632 Glycine max
Glyma.04G112600 10.0kb upstream 10.0kb upstream 19917 true Chr04: 12610633-12630549 Glycine max
Glyma.04G112600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12620550-12630549 Glycine max
Glyma.04G112600 10.0kb downstream 10.0kb downstream 19917 true Chr04: 12600633-12620549 Glycine max
Glyma.04G112600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12600633-12610632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314527 5265 Fabidae View MSA
124063232 5270 Rosid View MSA
123744572 5271 Pentapetalae View MSA
122792613 5272 Eudicot View MSA
122045785 5273 Angiosperm View MSA
121310502 5274 Embryophyte View MSA
123347970 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0164 0.0 37.5605   High
cufflinks 5.98889 0.0 22.4847   Low
cufflinks 8.9388 0.0 31.0528    
cufflinks 8.53673 0.0 29.9483    
cufflinks 7.45805 0.0 26.8947    
cufflinks 9.13753 0.0 31.7608    
cufflinks 9.63111 0.0 33.3506    
cufflinks 7.11594 0.0 25.7229    
cufflinks 7.89619 0.0 28.0957    
cufflinks 0.842        
cufflinks 0.567       Low
cufflinks 1.03        
cufflinks 0.867        
cufflinks 0.769        
cufflinks 0.735        
cufflinks 1.009        
cufflinks 0.439       Low
cufflinks 1.17       High
cufflinks 1.092        
cufflinks 1.145        
cufflinks 0.729        
cufflinks 1.224       High
cufflinks 1.099        
cufflinks 0.789        
cufflinks 1.135        
cufflinks 0.732        

0 Strain