Gene : Glyma.04G122100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12899:SF5 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  1221
Name:  ? Glyma.04G122100 Secondary Identifier:  ? PAC:30489708
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G122100 0.5kb upstream 0.5kb upstream 6162 true Chr04: 15579176-15585337 Glycine max
Glyma.04G122100 0.5kb upstream 0.5kb upstream 500 false Chr04: 15579176-15579675 Glycine max
Glyma.04G122100 0.5kb downstream 0.5kb downstream 6162 true Chr04: 15579676-15585837 Glycine max
Glyma.04G122100 0.5kb downstream 0.5kb downstream 500 false Chr04: 15585338-15585837 Glycine max
Glyma.04G122100 1.0kb upstream 1.0kb upstream 6662 true Chr04: 15578676-15585337 Glycine max
Glyma.04G122100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15578676-15579675 Glycine max
Glyma.04G122100 1.0kb downstream 1.0kb downstream 6662 true Chr04: 15579676-15586337 Glycine max
Glyma.04G122100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15585338-15586337 Glycine max
Glyma.04G122100 2.0kb upstream 2.0kb upstream 7662 true Chr04: 15577676-15585337 Glycine max
Glyma.04G122100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15577676-15579675 Glycine max
Glyma.04G122100 2.0kb downstream 2.0kb downstream 7662 true Chr04: 15579676-15587337 Glycine max
Glyma.04G122100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15585338-15587337 Glycine max
Glyma.04G122100 5.0kb upstream 5.0kb upstream 10662 true Chr04: 15574676-15585337 Glycine max
Glyma.04G122100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15574676-15579675 Glycine max
Glyma.04G122100 5.0kb downstream 5.0kb downstream 10662 true Chr04: 15579676-15590337 Glycine max
Glyma.04G122100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15585338-15590337 Glycine max
Glyma.04G122100 10.0kb upstream 10.0kb upstream 15662 true Chr04: 15569676-15585337 Glycine max
Glyma.04G122100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15569676-15579675 Glycine max
Glyma.04G122100 10.0kb downstream 10.0kb downstream 15662 true Chr04: 15579676-15595337 Glycine max
Glyma.04G122100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15585338-15595337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303550 5265 Fabidae View MSA
124063068 5270 Rosid View MSA
123738575 5271 Pentapetalae View MSA
122789251 5272 Eudicot View MSA
122043633 5273 Angiosperm View MSA
121351328 5274 Embryophyte View MSA
123382121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.93419 0.0 36.9461    
cufflinks 11.1384 0.0 56.0978   High
cufflinks 3.66482 0.0 20.701   Low
cufflinks 6.49319 0.0 40.6274    
cufflinks 6.478 0.0 39.04    
cufflinks 4.23218 0.0 29.9163   Low
cufflinks 8.74869 0.0 48.537    
cufflinks 6.23245 0.0 38.2437    
cufflinks 6.58829 0.0 30.9483    
cufflinks 0.204        
cufflinks 0.049     Low Low
cufflinks 0.339        
cufflinks 0.25        
cufflinks 0.309        
cufflinks 0.098        
cufflinks 0.271        
cufflinks 0.084       Low
cufflinks 0.385        
cufflinks 0.657       High
cufflinks 0.243        
cufflinks 0.075       Low
cufflinks 0.296        
cufflinks 0.46       High
cufflinks 0.083       Low
cufflinks 0.249        
cufflinks 0.089       Low

0 Strain