Gene : Glyma.04G117900 G. max Wm82.a2.v1
Defline:  (1 of 7) KOG3377 - Uncharacterized conserved protein Genomic Order:  1179
Name:  ? Glyma.04G117900 Secondary Identifier:  ? PAC:30487275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G117900 0.5kb upstream 0.5kb upstream 2810 true Chr04: 13850279-13853088 Glycine max
Glyma.04G117900 0.5kb upstream 0.5kb upstream 500 false Chr04: 13852589-13853088 Glycine max
Glyma.04G117900 0.5kb downstream 0.5kb downstream 2810 true Chr04: 13849779-13852588 Glycine max
Glyma.04G117900 0.5kb downstream 0.5kb downstream 500 false Chr04: 13849779-13850278 Glycine max
Glyma.04G117900 1.0kb upstream 1.0kb upstream 3310 true Chr04: 13850279-13853588 Glycine max
Glyma.04G117900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13852589-13853588 Glycine max
Glyma.04G117900 1.0kb downstream 1.0kb downstream 3310 true Chr04: 13849279-13852588 Glycine max
Glyma.04G117900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13849279-13850278 Glycine max
Glyma.04G117900 2.0kb upstream 2.0kb upstream 4310 true Chr04: 13850279-13854588 Glycine max
Glyma.04G117900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13852589-13854588 Glycine max
Glyma.04G117900 2.0kb downstream 2.0kb downstream 4310 true Chr04: 13848279-13852588 Glycine max
Glyma.04G117900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13848279-13850278 Glycine max
Glyma.04G117900 5.0kb upstream 5.0kb upstream 7310 true Chr04: 13850279-13857588 Glycine max
Glyma.04G117900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13852589-13857588 Glycine max
Glyma.04G117900 5.0kb downstream 5.0kb downstream 7310 true Chr04: 13845279-13852588 Glycine max
Glyma.04G117900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13845279-13850278 Glycine max
Glyma.04G117900 10.0kb upstream 10.0kb upstream 12310 true Chr04: 13850279-13862588 Glycine max
Glyma.04G117900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13852589-13862588 Glycine max
Glyma.04G117900 10.0kb downstream 10.0kb downstream 12310 true Chr04: 13840279-13852588 Glycine max
Glyma.04G117900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13840279-13850278 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304720 5265 Fabidae View MSA
124060709 5270 Rosid View MSA
123738503 5271 Pentapetalae View MSA
122790756 5272 Eudicot View MSA
122042648 5273 Angiosperm View MSA
121351365 5274 Embryophyte View MSA
123425243 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.41778 0.0 18.6355    
cufflinks 2.45404 0.0 18.0583    
cufflinks 0.895637 0.0 7.48622   Low
cufflinks 1.1256 0.0 6.50473   Low
cufflinks 2.05795 0.0 17.1145    
cufflinks 2.19931 0.0 14.3003    
cufflinks 1.91122 0.0 15.1633    
cufflinks 1.95924 0.0 13.5523    
cufflinks 2.67438 0.0 19.3748    
cufflinks 0.177        
cufflinks 0.321        
cufflinks 0.299        
cufflinks 0.617       High
cufflinks 1.022       High
cufflinks 0.259        
cufflinks 0.172        
cufflinks 0.149        
cufflinks 0.256        
cufflinks 0.352        
cufflinks 0.097       Low
cufflinks 0.223        
cufflinks 0.095       Low
cufflinks 0.223        
cufflinks 0.152        
cufflinks 0.133        
cufflinks 0.215        

0 Strain