Gene : Glyma.04G160800 G. max Wm82.a2.v1
Genomic Order:  1608 Name:  ? Glyma.04G160800
Secondary Identifier:  ? PAC:30490511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G160800 0.5kb upstream 0.5kb upstream 13924 true Chr04: 39840398-39854321 Glycine max
Glyma.04G160800 0.5kb upstream 0.5kb upstream 500 false Chr04: 39840398-39840897 Glycine max
Glyma.04G160800 0.5kb downstream 0.5kb downstream 13924 true Chr04: 39840898-39854821 Glycine max
Glyma.04G160800 0.5kb downstream 0.5kb downstream 500 false Chr04: 39854322-39854821 Glycine max
Glyma.04G160800 1.0kb upstream 1.0kb upstream 14424 true Chr04: 39839898-39854321 Glycine max
Glyma.04G160800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39839898-39840897 Glycine max
Glyma.04G160800 1.0kb downstream 1.0kb downstream 14424 true Chr04: 39840898-39855321 Glycine max
Glyma.04G160800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39854322-39855321 Glycine max
Glyma.04G160800 2.0kb upstream 2.0kb upstream 15424 true Chr04: 39838898-39854321 Glycine max
Glyma.04G160800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39838898-39840897 Glycine max
Glyma.04G160800 2.0kb downstream 2.0kb downstream 15424 true Chr04: 39840898-39856321 Glycine max
Glyma.04G160800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39854322-39856321 Glycine max
Glyma.04G160800 5.0kb upstream 5.0kb upstream 18424 true Chr04: 39835898-39854321 Glycine max
Glyma.04G160800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39835898-39840897 Glycine max
Glyma.04G160800 5.0kb downstream 5.0kb downstream 18424 true Chr04: 39840898-39859321 Glycine max
Glyma.04G160800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39854322-39859321 Glycine max
Glyma.04G160800 10.0kb upstream 10.0kb upstream 23424 true Chr04: 39830898-39854321 Glycine max
Glyma.04G160800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39830898-39840897 Glycine max
Glyma.04G160800 10.0kb downstream 10.0kb downstream 23424 true Chr04: 39840898-39864321 Glycine max
Glyma.04G160800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39854322-39864321 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307263 5265 Fabidae View MSA
124074322 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57456 0.0 10.8491    
cufflinks 3.22869 0.0 9.86871    
cufflinks 3.11612 0.0 9.52536    
cufflinks 4.5662 0.0 15.6694   High
cufflinks 3.12058 0.0 9.58828    
cufflinks 1.61236 0.0 5.56011   Low
cufflinks 4.3967 0.0 13.1629   High
cufflinks 3.2115 0.0 11.2806    
cufflinks 2.95002 0.0 10.5343    
cufflinks 0.698        
cufflinks 0.237       Low
cufflinks 0.936        
cufflinks 0.61        
cufflinks 0.664        
cufflinks 0.358       Low
cufflinks 0.694        
cufflinks 0.458        
cufflinks 0.99       High
cufflinks 1.187       High
cufflinks 0.753        
cufflinks 0.325       Low
cufflinks 0.804        
cufflinks 0.871        
cufflinks 0.327       Low
cufflinks 0.71        
cufflinks 0.403        

0 Strain