Gene : Glyma.04G169200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33415:SF3 - EMB514 Genomic Order:  1692
Name:  ? Glyma.04G169200 Secondary Identifier:  ? PAC:30490319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G169200 0.5kb upstream 0.5kb upstream 2402 true Chr04: 42358456-42360857 Glycine max
Glyma.04G169200 0.5kb upstream 0.5kb upstream 500 false Chr04: 42360358-42360857 Glycine max
Glyma.04G169200 0.5kb downstream 0.5kb downstream 2402 true Chr04: 42357956-42360357 Glycine max
Glyma.04G169200 0.5kb downstream 0.5kb downstream 500 false Chr04: 42357956-42358455 Glycine max
Glyma.04G169200 1.0kb upstream 1.0kb upstream 2902 true Chr04: 42358456-42361357 Glycine max
Glyma.04G169200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42360358-42361357 Glycine max
Glyma.04G169200 1.0kb downstream 1.0kb downstream 2902 true Chr04: 42357456-42360357 Glycine max
Glyma.04G169200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42357456-42358455 Glycine max
Glyma.04G169200 2.0kb upstream 2.0kb upstream 3902 true Chr04: 42358456-42362357 Glycine max
Glyma.04G169200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42360358-42362357 Glycine max
Glyma.04G169200 2.0kb downstream 2.0kb downstream 3902 true Chr04: 42356456-42360357 Glycine max
Glyma.04G169200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42356456-42358455 Glycine max
Glyma.04G169200 5.0kb upstream 5.0kb upstream 6902 true Chr04: 42358456-42365357 Glycine max
Glyma.04G169200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42360358-42365357 Glycine max
Glyma.04G169200 5.0kb downstream 5.0kb downstream 6902 true Chr04: 42353456-42360357 Glycine max
Glyma.04G169200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42353456-42358455 Glycine max
Glyma.04G169200 10.0kb upstream 10.0kb upstream 11902 true Chr04: 42358456-42370357 Glycine max
Glyma.04G169200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42360358-42370357 Glycine max
Glyma.04G169200 10.0kb downstream 10.0kb downstream 11902 true Chr04: 42348456-42360357 Glycine max
Glyma.04G169200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42348456-42358455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300763 5265 Fabidae View MSA
124063233 5270 Rosid View MSA
123742093 5271 Pentapetalae View MSA
122792599 5272 Eudicot View MSA
122051410 5273 Angiosperm View MSA
121348604 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.36382 0.0 30.438    
cufflinks 6.23244 0.0 22.9984    
cufflinks 2.43398 0.0 12.2702   Low
cufflinks 4.32128 0.0 17.8208    
cufflinks 11.3745 0.0 37.9956   High
cufflinks 6.03713 0.0 22.9165    
cufflinks 12.3667 0.0 38.409   High
cufflinks 4.40225 0.0 17.9728    
cufflinks 6.05781 0.0 22.7868    
cufflinks 1.271        
cufflinks 0.323       Low
cufflinks 1.455        
cufflinks 4.135       High
cufflinks 5.76       High
cufflinks 0.495       Low
cufflinks 1.254        
cufflinks 1.018        
cufflinks 1.27        
cufflinks 2.371       High
cufflinks 0.785        
cufflinks 0.47       Low
cufflinks 0.939        
cufflinks 1.516        
cufflinks 0.467       Low
cufflinks 0.937        
cufflinks 0.716        

0 Strain