Gene : Glyma.04G167900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21649:SF17 - CHLOROPHYLL A-B BINDING PROTEIN 4, CHLOROPLASTIC Genomic Order:  1679
Name:  ? Glyma.04G167900 Secondary Identifier:  ? PAC:30488416
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G167900 0.5kb upstream 0.5kb upstream 2666 true Chr04: 42124374-42127039 Glycine max
Glyma.04G167900 0.5kb upstream 0.5kb upstream 500 false Chr04: 42124374-42124873 Glycine max
Glyma.04G167900 0.5kb downstream 0.5kb downstream 2666 true Chr04: 42124874-42127539 Glycine max
Glyma.04G167900 0.5kb downstream 0.5kb downstream 500 false Chr04: 42127040-42127539 Glycine max
Glyma.04G167900 1.0kb upstream 1.0kb upstream 3166 true Chr04: 42123874-42127039 Glycine max
Glyma.04G167900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42123874-42124873 Glycine max
Glyma.04G167900 1.0kb downstream 1.0kb downstream 3166 true Chr04: 42124874-42128039 Glycine max
Glyma.04G167900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42127040-42128039 Glycine max
Glyma.04G167900 2.0kb upstream 2.0kb upstream 4166 true Chr04: 42122874-42127039 Glycine max
Glyma.04G167900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42122874-42124873 Glycine max
Glyma.04G167900 2.0kb downstream 2.0kb downstream 4166 true Chr04: 42124874-42129039 Glycine max
Glyma.04G167900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42127040-42129039 Glycine max
Glyma.04G167900 5.0kb upstream 5.0kb upstream 7166 true Chr04: 42119874-42127039 Glycine max
Glyma.04G167900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42119874-42124873 Glycine max
Glyma.04G167900 5.0kb downstream 5.0kb downstream 7166 true Chr04: 42124874-42132039 Glycine max
Glyma.04G167900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42127040-42132039 Glycine max
Glyma.04G167900 10.0kb upstream 10.0kb upstream 12166 true Chr04: 42114874-42127039 Glycine max
Glyma.04G167900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42114874-42124873 Glycine max
Glyma.04G167900 10.0kb downstream 10.0kb downstream 12166 true Chr04: 42124874-42137039 Glycine max
Glyma.04G167900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42127040-42137039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313401 5265 Fabidae View MSA
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 338.102 0.0 3373.09 High High
cufflinks 342.405 0.0 3417.04 High High
cufflinks 106.557 0.0 627.947 High  
cufflinks 218.207 0.0 1656.26 High  
cufflinks 14.9186 0.0 45.5866   Low
cufflinks 11.8069 0.0 55.3797   Low
cufflinks 80.9239 0.0 438.082 High  
cufflinks 187.9 0.0 1325.83 High  
cufflinks 11.1695 0.0 54.7978   Low
cufflinks 52.55     High  
cufflinks 0.044     Low  
cufflinks 45.36     High  
cufflinks 0.019     Low Low
cufflinks 0.007     Low Low
cufflinks 0.401        
cufflinks 259.122     High High
cufflinks 0.013     Low Low
cufflinks 42.315     High  
cufflinks 84.643     High  
cufflinks 337.317     High High
cufflinks 0.045     Low  
cufflinks 320.524     High High
cufflinks 201.067     High  
cufflinks 0.02     Low Low
cufflinks 309.644     High High
cufflinks 0.018     Low Low

0 Strain