Gene : Glyma.04G173000 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG0059 - Lipid exporter ABCA1 and related proteins, ABC superfamily Genomic Order:  1730
Name:  ? Glyma.04G173000 Secondary Identifier:  ? PAC:30489918
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G173000 0.5kb upstream 0.5kb upstream 8527 true Chr04: 43281139-43289665 Glycine max
Glyma.04G173000 0.5kb upstream 0.5kb upstream 500 false Chr04: 43281139-43281638 Glycine max
Glyma.04G173000 0.5kb downstream 0.5kb downstream 8527 true Chr04: 43281639-43290165 Glycine max
Glyma.04G173000 0.5kb downstream 0.5kb downstream 500 false Chr04: 43289666-43290165 Glycine max
Glyma.04G173000 1.0kb upstream 1.0kb upstream 9027 true Chr04: 43280639-43289665 Glycine max
Glyma.04G173000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43280639-43281638 Glycine max
Glyma.04G173000 1.0kb downstream 1.0kb downstream 9027 true Chr04: 43281639-43290665 Glycine max
Glyma.04G173000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43289666-43290665 Glycine max
Glyma.04G173000 2.0kb upstream 2.0kb upstream 10027 true Chr04: 43279639-43289665 Glycine max
Glyma.04G173000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43279639-43281638 Glycine max
Glyma.04G173000 2.0kb downstream 2.0kb downstream 10027 true Chr04: 43281639-43291665 Glycine max
Glyma.04G173000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43289666-43291665 Glycine max
Glyma.04G173000 5.0kb upstream 5.0kb upstream 13027 true Chr04: 43276639-43289665 Glycine max
Glyma.04G173000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43276639-43281638 Glycine max
Glyma.04G173000 5.0kb downstream 5.0kb downstream 13027 true Chr04: 43281639-43294665 Glycine max
Glyma.04G173000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43289666-43294665 Glycine max
Glyma.04G173000 10.0kb upstream 10.0kb upstream 18027 true Chr04: 43271639-43289665 Glycine max
Glyma.04G173000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43271639-43281638 Glycine max
Glyma.04G173000 10.0kb downstream 10.0kb downstream 18027 true Chr04: 43281639-43299665 Glycine max
Glyma.04G173000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43289666-43299665 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301698 5265 Fabidae View MSA
124067078 5270 Rosid View MSA
123750252 5271 Pentapetalae View MSA
122786986 5272 Eudicot View MSA
122046360 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121347402 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.255316 0.0 1.913    
cufflinks 0.0629102 0.0 0.248062 Low Low
cufflinks 1.23134 0.0 7.45693    
cufflinks 1.25177 0.0 6.32996    
cufflinks 2.8076 0.0 11.2352    
cufflinks 0.0982342 0.0 0.701397 Low Low
cufflinks 1.27156 0.0 6.38055    
cufflinks 0.443699 0.0 2.3831    
cufflinks 11.9569 0.0 48.4186   High
cufflinks 0.06     Low  
cufflinks 0.229        
cufflinks 0.208        
cufflinks 0.039     Low  
cufflinks 0.005     Low Low
cufflinks 8.953     High High
cufflinks 0.024     Low  
cufflinks 0.621       High
cufflinks 0.221        
cufflinks 0.036     Low  
cufflinks 0.027     Low  
cufflinks 0.166        
cufflinks 0.029     Low  
cufflinks 0.043     Low  
cufflinks 0.284        
cufflinks 0.03     Low  
cufflinks 0.308        

0 Strain