Gene : Glyma.04G002100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  21
Name:  ? Glyma.04G002100 Secondary Identifier:  ? PAC:30489595
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G002100 0.5kb upstream 0.5kb upstream 6559 true Chr04: 178282-184840 Glycine max
Glyma.04G002100 0.5kb upstream 0.5kb upstream 500 false Chr04: 178282-178781 Glycine max
Glyma.04G002100 0.5kb downstream 0.5kb downstream 6559 true Chr04: 178782-185340 Glycine max
Glyma.04G002100 0.5kb downstream 0.5kb downstream 500 false Chr04: 184841-185340 Glycine max
Glyma.04G002100 1.0kb upstream 1.0kb upstream 7059 true Chr04: 177782-184840 Glycine max
Glyma.04G002100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 177782-178781 Glycine max
Glyma.04G002100 1.0kb downstream 1.0kb downstream 7059 true Chr04: 178782-185840 Glycine max
Glyma.04G002100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 184841-185840 Glycine max
Glyma.04G002100 2.0kb upstream 2.0kb upstream 8059 true Chr04: 176782-184840 Glycine max
Glyma.04G002100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 176782-178781 Glycine max
Glyma.04G002100 2.0kb downstream 2.0kb downstream 8059 true Chr04: 178782-186840 Glycine max
Glyma.04G002100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 184841-186840 Glycine max
Glyma.04G002100 5.0kb upstream 5.0kb upstream 11059 true Chr04: 173782-184840 Glycine max
Glyma.04G002100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 173782-178781 Glycine max
Glyma.04G002100 5.0kb downstream 5.0kb downstream 11059 true Chr04: 178782-189840 Glycine max
Glyma.04G002100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 184841-189840 Glycine max
Glyma.04G002100 10.0kb upstream 10.0kb upstream 16059 true Chr04: 168782-184840 Glycine max
Glyma.04G002100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 168782-178781 Glycine max
Glyma.04G002100 10.0kb downstream 10.0kb downstream 16059 true Chr04: 178782-194840 Glycine max
Glyma.04G002100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 184841-194840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250052 5265 Fabidae View MSA
124041882 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.624535 0.0 2.89614   Low
cufflinks 4.85383 0.0 18.415   High
cufflinks 0.50251 0.0 3.20895   Low
cufflinks 2.00551 0.0 10.0021    
cufflinks 2.64138 0.0 12.1583    
cufflinks 2.05323 0.0 7.57357    
cufflinks 1.97191 0.0 9.95754    
cufflinks 2.8128 0.0 12.8865    
cufflinks 2.53964 0.0 11.7629    
cufflinks 0.261        
cufflinks 0.017     Low Low
cufflinks 0.268        
cufflinks 0.559       High
cufflinks 0.811       High
cufflinks 0.019     Low Low
cufflinks 0.175        
cufflinks 0.083        
cufflinks 0.265        
cufflinks 0.564       High
cufflinks 0.107        
cufflinks 0.051     Low  
cufflinks 0.137        
cufflinks 0.295        
cufflinks 0.035     Low Low
cufflinks 0.16        
cufflinks 0.077        

0 Strain