Gene : Glyma.04G015400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10516:SF319 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC Genomic Order:  154
Name:  ? Glyma.04G015400 Secondary Identifier:  ? PAC:30487166
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G015400 0.5kb upstream 0.5kb upstream 2614 true Chr04: 1174456-1177069 Glycine max
Glyma.04G015400 0.5kb upstream 0.5kb upstream 500 false Chr04: 1176570-1177069 Glycine max
Glyma.04G015400 0.5kb downstream 0.5kb downstream 2614 true Chr04: 1173956-1176569 Glycine max
Glyma.04G015400 0.5kb downstream 0.5kb downstream 500 false Chr04: 1173956-1174455 Glycine max
Glyma.04G015400 1.0kb upstream 1.0kb upstream 3114 true Chr04: 1174456-1177569 Glycine max
Glyma.04G015400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1176570-1177569 Glycine max
Glyma.04G015400 1.0kb downstream 1.0kb downstream 3114 true Chr04: 1173456-1176569 Glycine max
Glyma.04G015400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1173456-1174455 Glycine max
Glyma.04G015400 2.0kb upstream 2.0kb upstream 4114 true Chr04: 1174456-1178569 Glycine max
Glyma.04G015400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1176570-1178569 Glycine max
Glyma.04G015400 2.0kb downstream 2.0kb downstream 4114 true Chr04: 1172456-1176569 Glycine max
Glyma.04G015400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1172456-1174455 Glycine max
Glyma.04G015400 5.0kb upstream 5.0kb upstream 7114 true Chr04: 1174456-1181569 Glycine max
Glyma.04G015400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1176570-1181569 Glycine max
Glyma.04G015400 5.0kb downstream 5.0kb downstream 7114 true Chr04: 1169456-1176569 Glycine max
Glyma.04G015400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1169456-1174455 Glycine max
Glyma.04G015400 10.0kb upstream 10.0kb upstream 12114 true Chr04: 1174456-1186569 Glycine max
Glyma.04G015400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1176570-1186569 Glycine max
Glyma.04G015400 10.0kb downstream 10.0kb downstream 12114 true Chr04: 1164456-1176569 Glycine max
Glyma.04G015400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1164456-1174455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307112 5265 Fabidae View MSA
124060964 5270 Rosid View MSA
123739964 5271 Pentapetalae View MSA
122791539 5272 Eudicot View MSA
122046491 5273 Angiosperm View MSA
121345976 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5629 0.0 70.3855   High
cufflinks 8.91875 0.0 43.7043   High
cufflinks 1.56378 0.0 12.0856    
cufflinks 5.35726 0.0 28.8461    
cufflinks 1.74325 0.0 12.2144    
cufflinks 1.27205 0.0 7.4182    
cufflinks 2.41097 0.0 12.6427    
cufflinks 3.64253 0.0 20.3876    
cufflinks 0.725861 0.0 4.71286   Low
cufflinks 0.937        
cufflinks 0.002     Low Low
cufflinks 0.602        
cufflinks 0.023     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.824        
cufflinks 0.02     Low  
cufflinks 0.904        
cufflinks 1.173        
cufflinks 5.034        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.99        
cufflinks 3.884        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.629        
cufflinks 0.003     Low Low

0 Strain