Gene : Glyma.04G024800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12081:SF51 - TRANSCRIPTION FACTOR E2FC Genomic Order:  248
Name:  ? Glyma.04G024800 Secondary Identifier:  ? PAC:30487458
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G024800 0.5kb upstream 0.5kb upstream 4347 true Chr04: 1973911-1978257 Glycine max
Glyma.04G024800 0.5kb upstream 0.5kb upstream 500 false Chr04: 1973911-1974410 Glycine max
Glyma.04G024800 0.5kb downstream 0.5kb downstream 4347 true Chr04: 1974411-1978757 Glycine max
Glyma.04G024800 0.5kb downstream 0.5kb downstream 500 false Chr04: 1978258-1978757 Glycine max
Glyma.04G024800 1.0kb upstream 1.0kb upstream 4847 true Chr04: 1973411-1978257 Glycine max
Glyma.04G024800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1973411-1974410 Glycine max
Glyma.04G024800 1.0kb downstream 1.0kb downstream 4847 true Chr04: 1974411-1979257 Glycine max
Glyma.04G024800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1978258-1979257 Glycine max
Glyma.04G024800 2.0kb upstream 2.0kb upstream 5847 true Chr04: 1972411-1978257 Glycine max
Glyma.04G024800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1972411-1974410 Glycine max
Glyma.04G024800 2.0kb downstream 2.0kb downstream 5847 true Chr04: 1974411-1980257 Glycine max
Glyma.04G024800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1978258-1980257 Glycine max
Glyma.04G024800 5.0kb upstream 5.0kb upstream 8847 true Chr04: 1969411-1978257 Glycine max
Glyma.04G024800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1969411-1974410 Glycine max
Glyma.04G024800 5.0kb downstream 5.0kb downstream 8847 true Chr04: 1974411-1983257 Glycine max
Glyma.04G024800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1978258-1983257 Glycine max
Glyma.04G024800 10.0kb upstream 10.0kb upstream 13847 true Chr04: 1964411-1978257 Glycine max
Glyma.04G024800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1964411-1974410 Glycine max
Glyma.04G024800 10.0kb downstream 10.0kb downstream 13847 true Chr04: 1974411-1988257 Glycine max
Glyma.04G024800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1978258-1988257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792207 5273 Angiosperm View MSA
122305494 5265 Fabidae View MSA
124061286 5270 Rosid View MSA
123738589 5271 Pentapetalae View MSA
122796961 5272 Eudicot View MSA
121063453 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0828724 0.0 0.334313 Low Low
cufflinks 0.706712 0.0 5.03823    
cufflinks 0.398778 0.0 3.38474    
cufflinks 0.232464 0.0 1.99057    
cufflinks 2.86427 0.0 14.7256   High
cufflinks 1.33963 0.0 8.52004    
cufflinks 0.683218 0.0 4.96202    
cufflinks 0.503103 0.0 3.13726    
cufflinks 1.30683 0.0 8.54039    
cufflinks 0.035     Low  
cufflinks 0.026     Low Low
cufflinks 0.061     Low  
cufflinks 0.399       High
cufflinks 0.581       High
cufflinks 0.03     Low  
cufflinks 0.067     Low  
cufflinks 0.048     Low  
cufflinks 0.048     Low  
cufflinks 0.166       High
cufflinks 0.036     Low  
cufflinks 0.063        
cufflinks 0.046     Low  
cufflinks 0.105        
cufflinks 0.036     Low  
cufflinks 0.043     Low  
cufflinks 0.085        

0 Strain