Gene : Glyma.04G046200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24206:SF35 - TRANSCRIPTION FACTOR-RELATED Genomic Order:  462
Name:  ? Glyma.04G046200 Secondary Identifier:  ? PAC:30489088
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G046200 0.5kb upstream 0.5kb upstream 4815 true Chr04: 3691749-3696563 Glycine max
Glyma.04G046200 0.5kb upstream 0.5kb upstream 500 false Chr04: 3691749-3692248 Glycine max
Glyma.04G046200 0.5kb downstream 0.5kb downstream 4815 true Chr04: 3692249-3697063 Glycine max
Glyma.04G046200 0.5kb downstream 0.5kb downstream 500 false Chr04: 3696564-3697063 Glycine max
Glyma.04G046200 1.0kb upstream 1.0kb upstream 5315 true Chr04: 3691249-3696563 Glycine max
Glyma.04G046200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3691249-3692248 Glycine max
Glyma.04G046200 1.0kb downstream 1.0kb downstream 5315 true Chr04: 3692249-3697563 Glycine max
Glyma.04G046200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3696564-3697563 Glycine max
Glyma.04G046200 2.0kb upstream 2.0kb upstream 6315 true Chr04: 3690249-3696563 Glycine max
Glyma.04G046200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3690249-3692248 Glycine max
Glyma.04G046200 2.0kb downstream 2.0kb downstream 6315 true Chr04: 3692249-3698563 Glycine max
Glyma.04G046200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3696564-3698563 Glycine max
Glyma.04G046200 5.0kb upstream 5.0kb upstream 9315 true Chr04: 3687249-3696563 Glycine max
Glyma.04G046200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3687249-3692248 Glycine max
Glyma.04G046200 5.0kb downstream 5.0kb downstream 9315 true Chr04: 3692249-3701563 Glycine max
Glyma.04G046200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3696564-3701563 Glycine max
Glyma.04G046200 10.0kb upstream 10.0kb upstream 14315 true Chr04: 3682249-3696563 Glycine max
Glyma.04G046200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3682249-3692248 Glycine max
Glyma.04G046200 10.0kb downstream 10.0kb downstream 14315 true Chr04: 3692249-3706563 Glycine max
Glyma.04G046200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3696564-3706563 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309325 5265 Fabidae View MSA
124066867 5270 Rosid View MSA
123744734 5271 Pentapetalae View MSA
122789493 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.2777 0.0 102.422 High  
cufflinks 67.1466 0.0 185.586 High  
cufflinks 25.4241 0.0 67.8891 High Low
cufflinks 231.068 0.0 776.439 High High
cufflinks 31.9857 0.0 85.3562 High  
cufflinks 95.1206 0.0 273.096 High  
cufflinks 41.8979 0.0 112.459 High  
cufflinks 158.534 0.0 494.461 High High
cufflinks 35.8611 0.0 95.8667 High  
cufflinks 20.319     High High
cufflinks 3.61        
cufflinks 6.529        
cufflinks 4.711        
cufflinks 2.727        
cufflinks 0.493       Low
cufflinks 6.182        
cufflinks 5.555        
cufflinks 9.206     High  
cufflinks 12.371     High High
cufflinks 9.258     High  
cufflinks 4.484        
cufflinks 6.615        
cufflinks 3.563        
cufflinks 3.09        
cufflinks 7.909     High  
cufflinks 2.87        

0 Strain