Gene : Glyma.19G129000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 Genomic Order:  1290
Name:  ? Glyma.19G129000 Secondary Identifier:  ? PAC:30512072
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G129000 0.5kb upstream 0.5kb upstream 5875 true Chr19: 38833289-38839163 Glycine max
Glyma.19G129000 0.5kb upstream 0.5kb upstream 500 false Chr19: 38838664-38839163 Glycine max
Glyma.19G129000 0.5kb downstream 0.5kb downstream 5875 true Chr19: 38832789-38838663 Glycine max
Glyma.19G129000 0.5kb downstream 0.5kb downstream 500 false Chr19: 38832789-38833288 Glycine max
Glyma.19G129000 1.0kb upstream 1.0kb upstream 6375 true Chr19: 38833289-38839663 Glycine max
Glyma.19G129000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38838664-38839663 Glycine max
Glyma.19G129000 1.0kb downstream 1.0kb downstream 6375 true Chr19: 38832289-38838663 Glycine max
Glyma.19G129000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38832289-38833288 Glycine max
Glyma.19G129000 2.0kb upstream 2.0kb upstream 7375 true Chr19: 38833289-38840663 Glycine max
Glyma.19G129000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38838664-38840663 Glycine max
Glyma.19G129000 2.0kb downstream 2.0kb downstream 7375 true Chr19: 38831289-38838663 Glycine max
Glyma.19G129000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38831289-38833288 Glycine max
Glyma.19G129000 5.0kb upstream 5.0kb upstream 10375 true Chr19: 38833289-38843663 Glycine max
Glyma.19G129000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38838664-38843663 Glycine max
Glyma.19G129000 5.0kb downstream 5.0kb downstream 10375 true Chr19: 38828289-38838663 Glycine max
Glyma.19G129000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38828289-38833288 Glycine max
Glyma.19G129000 10.0kb upstream 10.0kb upstream 15375 true Chr19: 38833289-38848663 Glycine max
Glyma.19G129000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38838664-38848663 Glycine max
Glyma.19G129000 10.0kb downstream 10.0kb downstream 15375 true Chr19: 38823289-38838663 Glycine max
Glyma.19G129000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38823289-38833288 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301772 5265 Fabidae View MSA
124065091 5270 Rosid View MSA
123744917 5271 Pentapetalae View MSA
122785720 5272 Eudicot View MSA
122046479 5273 Angiosperm View MSA
121344622 5274 Embryophyte View MSA
123424882 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.99304 0.0 19.825    
cufflinks 4.5112 0.0 18.6196    
cufflinks 4.55106 0.0 18.349    
cufflinks 3.52033 0.0 13.1107   Low
cufflinks 7.08642 0.0 30.4115    
cufflinks 9.58147 0.0 33.2556   High
cufflinks 4.31844 0.0 15.7741    
cufflinks 5.50034 0.0 21.135    
cufflinks 5.56295 0.0 24.5759    
cufflinks 0.734        
cufflinks 0.722        
cufflinks 0.63        
cufflinks 1.102       High
cufflinks 1.409       High
cufflinks 0.597        
cufflinks 0.481       Low
cufflinks 0.564        
cufflinks 0.759        
cufflinks 0.679        
cufflinks 0.431       Low
cufflinks 0.789        
cufflinks 0.459       Low
cufflinks 0.612        
cufflinks 0.767        
cufflinks 0.443       Low
cufflinks 0.655        

0 Strain