Protein Family : suppressor of stem-loop protein 1, putative, expressed 123424882

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  76

76 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
232450 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 S. moellendorffii v1.0 1658   scaffold_26: 935493-937150
30111.t000034 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) R. communis v0.1 2645   30111: 252195-254839
Cucsa.128880 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. sativus v1.0 2573   scaffold01028: 38646-41218
orange1.1g014415m.g (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. sinensis v1.1 6242   scaffold00160: 50460-56701
orange1.1g014440m.g (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. sinensis v1.1 7487   scaffold00239: 7996-15482
AT1G05055 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) A. thaliana TAIR10 GTF2H2 2170   Chr1: 1448718-1450887
Thhalv10007730m.g (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 E. salsugineum v1.0 2129   scaffold_5: 14159862-14161990
Ciclev10011800m.g (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. clementina v1.0 6176   scaffold_6: 5886744-5892919
Ciclev10005033m.g (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. clementina v1.0 3435   scaffold_9: 10316807-10320241
Lus10029294.g (1 of 1) KOG2807 - RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 L. usitatissimum v1.0 1970   scaffold360: 510467-512436
Lus10016248.g (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 L. usitatissimum v1.0 2423   scaffold947: 458692-461114
Gorai.006G120700 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 G. raimondii v2.1 4316   Chr06: 37106843-37111158
e_gw1.5.246.1 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. subellipsoidea C-169 v2.0 2647   scaffold_5: 829886-832532
fgenesh1_pm_11_num_69 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 M. pusilla CCMP1545 v3.0 1607   scaffold_11: 337823-339429
EuGene.0200010146 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 M. sp RCC299 v3.0 2781   Chr_02: 1608074-1610854
e_gwEuk.6.244.1 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 O. lucimarinus v2.0 1224   Chr_6: 350603-351826
Thecc1EG041075 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) T. cacao v1.1 5211   scaffold_9: 35333838-35339048
Migut.D02195 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 M. guttatus v2.0 2839   scaffold_4: 18500237-18503075
Araha.5092s0007 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 A. halleri v1.1 2149   Scaffold5092: 28326-30474
Cagra.1671s0125 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 C. grandiflora v1.1 2195   Scaffold1671: 476020-478214
Glyma.11G073900 (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 G. max Wm82.a2.v1 4786   Chr11: 5510990-5515775
Glyma.19G129000 (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 G. max Wm82.a2.v1 5375   Chr19: 38833289-38838663
Brara.H03014 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 B. rapa FPsc v1.3 2605   A08: 22708753-22711357
Bostr.25219s0465 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 B. stricta v1.2 3156   Scaffold25219: 2129008-2132163
Cre03.g179550 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) C. reinhardtii v5.6 TF2H2 3682   chromosome_3: 4898503-4902184
Medtr7g089440 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 M. truncatula Mt4.0v1 5152   chr7: 35008143-35013294
SapurV1A.1217s0010 (1 of 2) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) S. purpurea v1.0 5473   Scaffold1217: 5137-10609
SapurV1A.0274s0010 (1 of 2) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) S. purpurea v1.0 5421   chr04: 5807909-5813329
evm_27.TU.AmTr_v1.0_scaffold00019.388 (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 A. trichopoda v1.0 3953   AmTr_v1.0_scaffold00019: 6033975-6037927
Traes_2BL_EEC1FBBAF (1 of 1) PF07975//PF13519 - TFIIH C1-like domain (C1_4) // von Willebrand factor type A domain (VWA_2) T. aestivum v2.2 3500   ta_iwgsc_2bl_v1_8076774: 6848-10347

76 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
232450 S. moellendorffii v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
30111.m000731 R. communis v0.1 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Cucsa.128880.1 C. sativus v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
orange1.1g014440m C. sinensis v1.1 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
orange1.1g014415m C. sinensis v1.1 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
AT1G05055.1 A. thaliana TAIR10 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Thhalv10007730m E. salsugineum v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Ciclev10005033m C. clementina v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
Ciclev10011800m C. clementina v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
Lus10016248 L. usitatissimum v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
Lus10029294 L. usitatissimum v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
Gorai.006G120700.1 G. raimondii v2.1 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
14278 C. subellipsoidea C-169 v2.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
206415 M. pusilla CCMP1545 v3.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
55769 M. sp RCC299 v3.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
41034 O. lucimarinus v2.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Thecc1EG041075t2 T. cacao v1.1 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Migut.D02195.1.p M. guttatus v2.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Araha.5092s0007.1.p A. halleri v1.1 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Cagra.1671s0125.1.p C. grandiflora v1.1 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Glyma.11G073900.1.p G. max Wm82.a2.v1 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
Glyma.19G129000.1.p G. max Wm82.a2.v1 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
Brara.H03014.1.p B. rapa FPsc v1.3 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Bostr.25219s0465.1.p B. stricta v1.2 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Cre03.g179550.t1.1 C. reinhardtii v5.6 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Medtr7g089440.3 M. truncatula Mt4.0v1 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
SapurV1A.1217s0010.1.p S. purpurea v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
SapurV1A.0274s0010.1.p S. purpurea v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 2 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00019.388 A. trichopoda v1.0 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae
Traes_2BL_EEC1FBBAF.1 T. aestivum v2.2 123424882 suppressor of stem-loop protein 1, putative, expressed 1 5275 Viridiplantae