Gene : SapurV1A.1217s0010 S. purpurea v1.0

Defline:  (1 of 2) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) Genomic Order:  1
Name:  ? SapurV1A.1217s0010 Secondary Identifier:  ? PAC:31401951

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1217s0010 0.5kb upstream 0.5kb upstream 5973 true Scaffold1217: 4637-10609 Salix purpurea
SapurV1A.1217s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1217: 4637-5136 Salix purpurea
SapurV1A.1217s0010 0.5kb downstream 0.5kb downstream 5973 true Scaffold1217: 5137-11109 Salix purpurea
SapurV1A.1217s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1217: 10610-11109 Salix purpurea
SapurV1A.1217s0010 1.0kb upstream 1.0kb upstream 6473 true Scaffold1217: 4137-10609 Salix purpurea
SapurV1A.1217s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1217: 4137-5136 Salix purpurea
SapurV1A.1217s0010 1.0kb downstream 1.0kb downstream 6473 true Scaffold1217: 5137-11609 Salix purpurea
SapurV1A.1217s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1217: 10610-11609 Salix purpurea
SapurV1A.1217s0010 2.0kb upstream 2.0kb upstream 7473 true Scaffold1217: 3137-10609 Salix purpurea
SapurV1A.1217s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1217: 3137-5136 Salix purpurea
SapurV1A.1217s0010 2.0kb downstream 2.0kb downstream 7473 true Scaffold1217: 5137-12609 Salix purpurea
SapurV1A.1217s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1217: 10610-12609 Salix purpurea
SapurV1A.1217s0010 5.0kb upstream 5.0kb upstream 10473 true Scaffold1217: 137-10609 Salix purpurea
SapurV1A.1217s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1217: 137-5136 Salix purpurea
SapurV1A.1217s0010 5.0kb downstream 5.0kb downstream 10473 true Scaffold1217: 5137-15609 Salix purpurea
SapurV1A.1217s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1217: 10610-15609 Salix purpurea
SapurV1A.1217s0010 10.0kb upstream 10.0kb upstream 10609 true Scaffold1217: 1-10609 Salix purpurea
SapurV1A.1217s0010 10.0kb upstream 10.0kb upstream 5136 false Scaffold1217: 1-5136 Salix purpurea
SapurV1A.1217s0010 10.0kb downstream 10.0kb downstream 15473 true Scaffold1217: 5137-20609 Salix purpurea
SapurV1A.1217s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1217: 10610-20609 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122410999 5262 Malpighiales View MSA
124240890 5268 Malvidae View MSA
124065091 5270 Rosid View MSA
123744917 5271 Pentapetalae View MSA
122785720 5272 Eudicot View MSA
122046479 5273 Angiosperm View MSA
121344622 5274 Embryophyte View MSA
123424882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain