Gene : Thecc1EG041075 T. cacao v1.1
Defline:  (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1) Genomic Order:  2551
Name:  ? Thecc1EG041075 Secondary Identifier:  ? PAC:27429993
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041075 0.5kb upstream 0.5kb upstream 5711 true scaffold_9: 35333338-35339048 Theobroma cacao
Thecc1EG041075 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35333338-35333837 Theobroma cacao
Thecc1EG041075 0.5kb downstream 0.5kb downstream 5711 true scaffold_9: 35333838-35339548 Theobroma cacao
Thecc1EG041075 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35339049-35339548 Theobroma cacao
Thecc1EG041075 1.0kb upstream 1.0kb upstream 6211 true scaffold_9: 35332838-35339048 Theobroma cacao
Thecc1EG041075 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35332838-35333837 Theobroma cacao
Thecc1EG041075 1.0kb downstream 1.0kb downstream 6211 true scaffold_9: 35333838-35340048 Theobroma cacao
Thecc1EG041075 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35339049-35340048 Theobroma cacao
Thecc1EG041075 2.0kb upstream 2.0kb upstream 7211 true scaffold_9: 35331838-35339048 Theobroma cacao
Thecc1EG041075 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35331838-35333837 Theobroma cacao
Thecc1EG041075 2.0kb downstream 2.0kb downstream 7211 true scaffold_9: 35333838-35341048 Theobroma cacao
Thecc1EG041075 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35339049-35341048 Theobroma cacao
Thecc1EG041075 5.0kb upstream 5.0kb upstream 10211 true scaffold_9: 35328838-35339048 Theobroma cacao
Thecc1EG041075 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35328838-35333837 Theobroma cacao
Thecc1EG041075 5.0kb downstream 5.0kb downstream 10211 true scaffold_9: 35333838-35344048 Theobroma cacao
Thecc1EG041075 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35339049-35344048 Theobroma cacao
Thecc1EG041075 10.0kb upstream 10.0kb upstream 15211 true scaffold_9: 35323838-35339048 Theobroma cacao
Thecc1EG041075 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35323838-35333837 Theobroma cacao
Thecc1EG041075 10.0kb downstream 10.0kb downstream 15211 true scaffold_9: 35333838-35349048 Theobroma cacao
Thecc1EG041075 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35339049-35349048 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827435 5264 Brassicales-Malvales View MSA
124349366 5266 SBM View MSA
124240890 5268 Malvidae View MSA
124065091 5270 Rosid View MSA
123744917 5271 Pentapetalae View MSA
122785720 5272 Eudicot View MSA
122046479 5273 Angiosperm View MSA
121344622 5274 Embryophyte View MSA
123424882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain