Gene : orange1.1g014440m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 Genomic Order:  1
Name:  ? orange1.1g014440m.g Secondary Identifier:  ? PAC:18117001
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g014440m.g 0.5kb upstream 0.5kb upstream 7987 true scaffold00239: 7996-15982 Citrus sinensis
orange1.1g014440m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00239: 15483-15982 Citrus sinensis
orange1.1g014440m.g 0.5kb downstream 0.5kb downstream 7987 true scaffold00239: 7496-15482 Citrus sinensis
orange1.1g014440m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00239: 7496-7995 Citrus sinensis
orange1.1g014440m.g 1.0kb upstream 1.0kb upstream 8487 true scaffold00239: 7996-16482 Citrus sinensis
orange1.1g014440m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00239: 15483-16482 Citrus sinensis
orange1.1g014440m.g 1.0kb downstream 1.0kb downstream 8487 true scaffold00239: 6996-15482 Citrus sinensis
orange1.1g014440m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00239: 6996-7995 Citrus sinensis
orange1.1g014440m.g 2.0kb upstream 2.0kb upstream 9487 true scaffold00239: 7996-17482 Citrus sinensis
orange1.1g014440m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00239: 15483-17482 Citrus sinensis
orange1.1g014440m.g 2.0kb downstream 2.0kb downstream 9487 true scaffold00239: 5996-15482 Citrus sinensis
orange1.1g014440m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00239: 5996-7995 Citrus sinensis
orange1.1g014440m.g 5.0kb upstream 5.0kb upstream 12487 true scaffold00239: 7996-20482 Citrus sinensis
orange1.1g014440m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00239: 15483-20482 Citrus sinensis
orange1.1g014440m.g 5.0kb downstream 5.0kb downstream 12487 true scaffold00239: 2996-15482 Citrus sinensis
orange1.1g014440m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00239: 2996-7995 Citrus sinensis
orange1.1g014440m.g 10.0kb upstream 10.0kb upstream 17487 true scaffold00239: 7996-25482 Citrus sinensis
orange1.1g014440m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00239: 15483-25482 Citrus sinensis
orange1.1g014440m.g 10.0kb downstream 10.0kb downstream 15482 true scaffold00239: 1-15482 Citrus sinensis
orange1.1g014440m.g 10.0kb downstream 10.0kb downstream 7995 false scaffold00239: 1-7995 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124349366 5266 SBM View MSA
124240890 5268 Malvidae View MSA
124065091 5270 Rosid View MSA
123744917 5271 Pentapetalae View MSA
122785720 5272 Eudicot View MSA
122046479 5273 Angiosperm View MSA
121344622 5274 Embryophyte View MSA
123424882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain