Gene : Glyma.04G052100 G. max Wm82.a2.v1
Defline:  (1 of 3) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase Genomic Order:  521
Name:  ? Glyma.04G052100 Secondary Identifier:  ? PAC:30489116
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G052100 0.5kb upstream 0.5kb upstream 8730 true Chr04: 4227926-4236655 Glycine max
Glyma.04G052100 0.5kb upstream 0.5kb upstream 500 false Chr04: 4227926-4228425 Glycine max
Glyma.04G052100 0.5kb downstream 0.5kb downstream 8730 true Chr04: 4228426-4237155 Glycine max
Glyma.04G052100 0.5kb downstream 0.5kb downstream 500 false Chr04: 4236656-4237155 Glycine max
Glyma.04G052100 1.0kb upstream 1.0kb upstream 9230 true Chr04: 4227426-4236655 Glycine max
Glyma.04G052100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4227426-4228425 Glycine max
Glyma.04G052100 1.0kb downstream 1.0kb downstream 9230 true Chr04: 4228426-4237655 Glycine max
Glyma.04G052100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4236656-4237655 Glycine max
Glyma.04G052100 2.0kb upstream 2.0kb upstream 10230 true Chr04: 4226426-4236655 Glycine max
Glyma.04G052100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4226426-4228425 Glycine max
Glyma.04G052100 2.0kb downstream 2.0kb downstream 10230 true Chr04: 4228426-4238655 Glycine max
Glyma.04G052100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4236656-4238655 Glycine max
Glyma.04G052100 5.0kb upstream 5.0kb upstream 13230 true Chr04: 4223426-4236655 Glycine max
Glyma.04G052100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4223426-4228425 Glycine max
Glyma.04G052100 5.0kb downstream 5.0kb downstream 13230 true Chr04: 4228426-4241655 Glycine max
Glyma.04G052100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4236656-4241655 Glycine max
Glyma.04G052100 10.0kb upstream 10.0kb upstream 18230 true Chr04: 4218426-4236655 Glycine max
Glyma.04G052100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4218426-4228425 Glycine max
Glyma.04G052100 10.0kb downstream 10.0kb downstream 18230 true Chr04: 4228426-4246655 Glycine max
Glyma.04G052100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4236656-4246655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311228 5265 Fabidae View MSA
124063797 5270 Rosid View MSA
123749479 5271 Pentapetalae View MSA
122792972 5272 Eudicot View MSA
122047544 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121347167 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.285385 0.0 1.43983    
cufflinks 0.0315363 0.0 0.133019 Low Low
cufflinks 2.93089 0.0 13.5621    
cufflinks 0.0677787 0.0 0.271054 Low  
cufflinks 8.98625 0.0 27.7457    
cufflinks 59.9553 0.0 221.597 High High
cufflinks 0.028931 0.0 0.123598 Low Low
cufflinks 0.464703 0.0 2.85849    
cufflinks 11.3567 0.0 39.6097    
cufflinks 0.004     Low  
cufflinks 0.334        
cufflinks 0.054     Low  
cufflinks 0.342        
cufflinks 0.02     Low  
cufflinks 0.341        
cufflinks 0.003     Low  
cufflinks 1.317       High
cufflinks 0.027     Low  
cufflinks 0.008     Low  
cufflinks 0.002     Low Low
cufflinks 0.461        
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 1.063       High
cufflinks 0.001     Low Low
cufflinks 0.643       High

0 Strain