Gene : Glyma.04G048600 G. max Wm82.a2.v1
Genomic Order:  486 Name:  ? Glyma.04G048600
Secondary Identifier:  ? PAC:30490276
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G048600 0.5kb upstream 0.5kb upstream 3985 true Chr04: 3909184-3913168 Glycine max
Glyma.04G048600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3909184-3909683 Glycine max
Glyma.04G048600 0.5kb downstream 0.5kb downstream 3985 true Chr04: 3909684-3913668 Glycine max
Glyma.04G048600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3913169-3913668 Glycine max
Glyma.04G048600 1.0kb upstream 1.0kb upstream 4485 true Chr04: 3908684-3913168 Glycine max
Glyma.04G048600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3908684-3909683 Glycine max
Glyma.04G048600 1.0kb downstream 1.0kb downstream 4485 true Chr04: 3909684-3914168 Glycine max
Glyma.04G048600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3913169-3914168 Glycine max
Glyma.04G048600 2.0kb upstream 2.0kb upstream 5485 true Chr04: 3907684-3913168 Glycine max
Glyma.04G048600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3907684-3909683 Glycine max
Glyma.04G048600 2.0kb downstream 2.0kb downstream 5485 true Chr04: 3909684-3915168 Glycine max
Glyma.04G048600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3913169-3915168 Glycine max
Glyma.04G048600 5.0kb upstream 5.0kb upstream 8485 true Chr04: 3904684-3913168 Glycine max
Glyma.04G048600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3904684-3909683 Glycine max
Glyma.04G048600 5.0kb downstream 5.0kb downstream 8485 true Chr04: 3909684-3918168 Glycine max
Glyma.04G048600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3913169-3918168 Glycine max
Glyma.04G048600 10.0kb upstream 10.0kb upstream 13485 true Chr04: 3899684-3913168 Glycine max
Glyma.04G048600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3899684-3909683 Glycine max
Glyma.04G048600 10.0kb downstream 10.0kb downstream 13485 true Chr04: 3909684-3923168 Glycine max
Glyma.04G048600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3913169-3923168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314102 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17771 0.0 10.4829    
cufflinks 4.22353 0.0 13.3942    
cufflinks 1.49141 0.0 5.29596   Low
cufflinks 7.61267 0.0 22.1986    
cufflinks 7.26615 0.0 21.3668    
cufflinks 7.19756 0.0 21.1604    
cufflinks 0.6438 0.0 2.40843   Low
cufflinks 12.5384 0.0 34.6854   High
cufflinks 3.10044 0.0 10.2493    
cufflinks 8.382     High High
cufflinks 4.261        
cufflinks 1.078        
cufflinks 2.038        
cufflinks 3.056        
cufflinks 0.807       Low
cufflinks 1.232        
cufflinks 11.333     High High
cufflinks 3.219        
cufflinks 1.411        
cufflinks 0.597       Low
cufflinks 4.009        
cufflinks 0.976        
cufflinks 1.115        
cufflinks 4.358        
cufflinks 0.757       Low
cufflinks 4.144        

0 Strain