Gene : Glyma.19G131100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31568:SF9 - PROTEIN CC8.3-RELATED Genomic Order:  1311
Name:  ? Glyma.19G131100 Secondary Identifier:  ? PAC:30512256
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G131100 0.5kb upstream 0.5kb upstream 1507 true Chr19: 39173333-39174839 Glycine max
Glyma.19G131100 0.5kb upstream 0.5kb upstream 500 false Chr19: 39173333-39173832 Glycine max
Glyma.19G131100 0.5kb downstream 0.5kb downstream 1507 true Chr19: 39173833-39175339 Glycine max
Glyma.19G131100 0.5kb downstream 0.5kb downstream 500 false Chr19: 39174840-39175339 Glycine max
Glyma.19G131100 1.0kb upstream 1.0kb upstream 2007 true Chr19: 39172833-39174839 Glycine max
Glyma.19G131100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39172833-39173832 Glycine max
Glyma.19G131100 1.0kb downstream 1.0kb downstream 2007 true Chr19: 39173833-39175839 Glycine max
Glyma.19G131100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39174840-39175839 Glycine max
Glyma.19G131100 2.0kb upstream 2.0kb upstream 3007 true Chr19: 39171833-39174839 Glycine max
Glyma.19G131100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39171833-39173832 Glycine max
Glyma.19G131100 2.0kb downstream 2.0kb downstream 3007 true Chr19: 39173833-39176839 Glycine max
Glyma.19G131100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39174840-39176839 Glycine max
Glyma.19G131100 5.0kb upstream 5.0kb upstream 6007 true Chr19: 39168833-39174839 Glycine max
Glyma.19G131100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39168833-39173832 Glycine max
Glyma.19G131100 5.0kb downstream 5.0kb downstream 6007 true Chr19: 39173833-39179839 Glycine max
Glyma.19G131100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39174840-39179839 Glycine max
Glyma.19G131100 10.0kb upstream 10.0kb upstream 11007 true Chr19: 39163833-39174839 Glycine max
Glyma.19G131100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39163833-39173832 Glycine max
Glyma.19G131100 10.0kb downstream 10.0kb downstream 11007 true Chr19: 39173833-39184839 Glycine max
Glyma.19G131100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39174840-39184839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312178 5265 Fabidae View MSA
124074312 5270 Rosid View MSA
123741317 5271 Pentapetalae View MSA
122791378 5272 Eudicot View MSA
122050585 5273 Angiosperm View MSA
121312007 5274 Embryophyte View MSA
123349224 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.745 0.0 34.2936    
cufflinks 0.987254 0.0 3.78351   Low
cufflinks 11.3518 0.0 35.7235    
cufflinks 2.64043 0.0 9.64161   Low
cufflinks 18.2288 0.0 53.7291    
cufflinks 10.7798 0.0 34.3808    
cufflinks 5.93527 0.0 20.3757    
cufflinks 16.8371 0.0 50.2437    
cufflinks 25.3602 0.0 71.8874 High High
cufflinks 5.312        
cufflinks 9.686     High  
cufflinks 5.316        
cufflinks 11.126     High  
cufflinks 7.349     High  
cufflinks 6.721     High  
cufflinks 0.458       Low
cufflinks 12.051     High High
cufflinks 2.221        
cufflinks 0.465       Low
cufflinks 0.406       Low
cufflinks 12.702     High High
cufflinks 0.401       Low
cufflinks 0.397       Low
cufflinks 11.345     High High
cufflinks 0.853        
cufflinks 4.077        

0 Strain