Gene : Glyma.19G122300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31810:SF2 - METACASPASE-9 Genomic Order:  1223
Name:  ? Glyma.19G122300 Secondary Identifier:  ? PAC:30511323
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G122300 0.5kb upstream 0.5kb upstream 2762 true Chr19: 38057815-38060576 Glycine max
Glyma.19G122300 0.5kb upstream 0.5kb upstream 500 false Chr19: 38060077-38060576 Glycine max
Glyma.19G122300 0.5kb downstream 0.5kb downstream 2762 true Chr19: 38057315-38060076 Glycine max
Glyma.19G122300 0.5kb downstream 0.5kb downstream 500 false Chr19: 38057315-38057814 Glycine max
Glyma.19G122300 1.0kb upstream 1.0kb upstream 3262 true Chr19: 38057815-38061076 Glycine max
Glyma.19G122300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38060077-38061076 Glycine max
Glyma.19G122300 1.0kb downstream 1.0kb downstream 3262 true Chr19: 38056815-38060076 Glycine max
Glyma.19G122300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38056815-38057814 Glycine max
Glyma.19G122300 2.0kb upstream 2.0kb upstream 4262 true Chr19: 38057815-38062076 Glycine max
Glyma.19G122300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38060077-38062076 Glycine max
Glyma.19G122300 2.0kb downstream 2.0kb downstream 4262 true Chr19: 38055815-38060076 Glycine max
Glyma.19G122300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38055815-38057814 Glycine max
Glyma.19G122300 5.0kb upstream 5.0kb upstream 7262 true Chr19: 38057815-38065076 Glycine max
Glyma.19G122300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38060077-38065076 Glycine max
Glyma.19G122300 5.0kb downstream 5.0kb downstream 7262 true Chr19: 38052815-38060076 Glycine max
Glyma.19G122300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38052815-38057814 Glycine max
Glyma.19G122300 10.0kb upstream 10.0kb upstream 12262 true Chr19: 38057815-38070076 Glycine max
Glyma.19G122300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38060077-38070076 Glycine max
Glyma.19G122300 10.0kb downstream 10.0kb downstream 12262 true Chr19: 38047815-38060076 Glycine max
Glyma.19G122300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38047815-38057814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307116 5265 Fabidae View MSA
124068471 5270 Rosid View MSA
123742985 5271 Pentapetalae View MSA
122785731 5272 Eudicot View MSA
122044719 5273 Angiosperm View MSA
121310334 5274 Embryophyte View MSA
123426896 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49701 0.0 5.26083    
cufflinks 2.68225 0.0 8.88864    
cufflinks 52.7326 0.0 144.911 High High
cufflinks 0.883685 0.0 3.22077   Low
cufflinks 2.30056 0.0 7.71887    
cufflinks 12.8495 0.0 35.0449    
cufflinks 2.22529 0.0 7.49503    
cufflinks 2.66464 0.0 8.784    
cufflinks 7.59099 0.0 21.7171    
cufflinks 2.449        
cufflinks 0.87        
cufflinks 18.65     High High
cufflinks 5.41        
cufflinks 0.496       Low
cufflinks 0.141       Low
cufflinks 2.966        
cufflinks 1.49        
cufflinks 5.854        
cufflinks 1.619        
cufflinks 3.356        
cufflinks 1.062        
cufflinks 3.735        
cufflinks 2.605        
cufflinks 0.822        
cufflinks 3.013        
cufflinks 2.174        

0 Strain