Gene : Glyma.03G248800 G. max Wm82.a2.v1
Defline:  (1 of 28) PF04576 - Zein-binding (Zein-binding) Genomic Order:  2488
Name:  ? Glyma.03G248800 Secondary Identifier:  ? PAC:30515327
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G248800 0.5kb upstream 0.5kb upstream 6227 true Chr03: 44505960-44512186 Glycine max
Glyma.03G248800 0.5kb upstream 0.5kb upstream 500 false Chr03: 44505960-44506459 Glycine max
Glyma.03G248800 0.5kb downstream 0.5kb downstream 6227 true Chr03: 44506460-44512686 Glycine max
Glyma.03G248800 0.5kb downstream 0.5kb downstream 500 false Chr03: 44512187-44512686 Glycine max
Glyma.03G248800 1.0kb upstream 1.0kb upstream 6727 true Chr03: 44505460-44512186 Glycine max
Glyma.03G248800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44505460-44506459 Glycine max
Glyma.03G248800 1.0kb downstream 1.0kb downstream 6727 true Chr03: 44506460-44513186 Glycine max
Glyma.03G248800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44512187-44513186 Glycine max
Glyma.03G248800 2.0kb upstream 2.0kb upstream 7727 true Chr03: 44504460-44512186 Glycine max
Glyma.03G248800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44504460-44506459 Glycine max
Glyma.03G248800 2.0kb downstream 2.0kb downstream 7727 true Chr03: 44506460-44514186 Glycine max
Glyma.03G248800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44512187-44514186 Glycine max
Glyma.03G248800 5.0kb upstream 5.0kb upstream 10727 true Chr03: 44501460-44512186 Glycine max
Glyma.03G248800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44501460-44506459 Glycine max
Glyma.03G248800 5.0kb downstream 5.0kb downstream 10727 true Chr03: 44506460-44517186 Glycine max
Glyma.03G248800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44512187-44517186 Glycine max
Glyma.03G248800 10.0kb upstream 10.0kb upstream 15727 true Chr03: 44496460-44512186 Glycine max
Glyma.03G248800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44496460-44506459 Glycine max
Glyma.03G248800 10.0kb downstream 10.0kb downstream 15727 true Chr03: 44506460-44522186 Glycine max
Glyma.03G248800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44512187-44522186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305379 5265 Fabidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.26263 0.0 18.5707    
cufflinks 2.69466 0.0 9.85106    
cufflinks 7.68907 0.0 31.5524    
cufflinks 4.11952 0.0 15.097    
cufflinks 4.56555 0.0 16.5129    
cufflinks 13.9492 0.0 47.9475   High
cufflinks 1.57109 0.0 7.69188   Low
cufflinks 6.63173 0.0 25.464    
cufflinks 4.53781 0.0 16.5186    
cufflinks 1.385        
cufflinks 2.945       High
cufflinks 1.205        
cufflinks 1.38        
cufflinks 0.967        
cufflinks 0.682       Low
cufflinks 0.971        
cufflinks 3.795       High
cufflinks 0.993        
cufflinks 0.621       Low
cufflinks 0.801        
cufflinks 3.138       High
cufflinks 0.952        
cufflinks 0.566       Low
cufflinks 3.114       High
cufflinks 0.907        
cufflinks 3.577       High

0 Strain