Gene : Glyma.19G122900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C Genomic Order:  1229
Name:  ? Glyma.19G122900 Secondary Identifier:  ? PAC:30515064
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G122900 0.5kb upstream 0.5kb upstream 7155 true Chr19: 38107100-38114254 Glycine max
Glyma.19G122900 0.5kb upstream 0.5kb upstream 500 false Chr19: 38113755-38114254 Glycine max
Glyma.19G122900 0.5kb downstream 0.5kb downstream 7155 true Chr19: 38106600-38113754 Glycine max
Glyma.19G122900 0.5kb downstream 0.5kb downstream 500 false Chr19: 38106600-38107099 Glycine max
Glyma.19G122900 1.0kb upstream 1.0kb upstream 7655 true Chr19: 38107100-38114754 Glycine max
Glyma.19G122900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38113755-38114754 Glycine max
Glyma.19G122900 1.0kb downstream 1.0kb downstream 7655 true Chr19: 38106100-38113754 Glycine max
Glyma.19G122900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38106100-38107099 Glycine max
Glyma.19G122900 2.0kb upstream 2.0kb upstream 8655 true Chr19: 38107100-38115754 Glycine max
Glyma.19G122900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38113755-38115754 Glycine max
Glyma.19G122900 2.0kb downstream 2.0kb downstream 8655 true Chr19: 38105100-38113754 Glycine max
Glyma.19G122900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38105100-38107099 Glycine max
Glyma.19G122900 5.0kb upstream 5.0kb upstream 11655 true Chr19: 38107100-38118754 Glycine max
Glyma.19G122900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38113755-38118754 Glycine max
Glyma.19G122900 5.0kb downstream 5.0kb downstream 11655 true Chr19: 38102100-38113754 Glycine max
Glyma.19G122900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38102100-38107099 Glycine max
Glyma.19G122900 10.0kb upstream 10.0kb upstream 16655 true Chr19: 38107100-38123754 Glycine max
Glyma.19G122900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38113755-38123754 Glycine max
Glyma.19G122900 10.0kb downstream 10.0kb downstream 16655 true Chr19: 38097100-38113754 Glycine max
Glyma.19G122900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38097100-38107099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305047 5265 Fabidae View MSA
124069346 5270 Rosid View MSA
123739331 5271 Pentapetalae View MSA
122793015 5272 Eudicot View MSA
122047267 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310718 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.4711 0.0 103.129 High High
cufflinks 22.6341 0.0 71.3194 High  
cufflinks 21.085 0.0 65.8353 High  
cufflinks 25.6023 0.0 83.1091 High  
cufflinks 24.5594 0.0 80.1098 High  
cufflinks 11.4144 0.0 33.8506   Low
cufflinks 25.3097 0.0 82.5837 High  
cufflinks 25.7828 0.0 83.2013 High  
cufflinks 19.9596 0.0 62.0017 High  
cufflinks 7.321        
cufflinks 2.354       Low
cufflinks 7.814     High  
cufflinks 5.925        
cufflinks 7.557     High  
cufflinks 3.072       Low
cufflinks 8.23     High  
cufflinks 4.119        
cufflinks 7.526     High  
cufflinks 9.284     High High
cufflinks 7.157     High  
cufflinks 4.17        
cufflinks 7.427     High  
cufflinks 8.209     High  
cufflinks 3.664       Low
cufflinks 6.815        
cufflinks 5.461        

0 Strain