Gene : Glyma.03G253100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23315//PTHR23315:SF80 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Genomic Order:  2531
Name:  ? Glyma.03G253100 Secondary Identifier:  ? PAC:30516931
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G253100 0.5kb upstream 0.5kb upstream 2453 true Chr03: 44879986-44882438 Glycine max
Glyma.03G253100 0.5kb upstream 0.5kb upstream 500 false Chr03: 44879986-44880485 Glycine max
Glyma.03G253100 0.5kb downstream 0.5kb downstream 2453 true Chr03: 44880486-44882938 Glycine max
Glyma.03G253100 0.5kb downstream 0.5kb downstream 500 false Chr03: 44882439-44882938 Glycine max
Glyma.03G253100 1.0kb upstream 1.0kb upstream 2953 true Chr03: 44879486-44882438 Glycine max
Glyma.03G253100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44879486-44880485 Glycine max
Glyma.03G253100 1.0kb downstream 1.0kb downstream 2953 true Chr03: 44880486-44883438 Glycine max
Glyma.03G253100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44882439-44883438 Glycine max
Glyma.03G253100 2.0kb upstream 2.0kb upstream 3953 true Chr03: 44878486-44882438 Glycine max
Glyma.03G253100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44878486-44880485 Glycine max
Glyma.03G253100 2.0kb downstream 2.0kb downstream 3953 true Chr03: 44880486-44884438 Glycine max
Glyma.03G253100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44882439-44884438 Glycine max
Glyma.03G253100 5.0kb upstream 5.0kb upstream 6953 true Chr03: 44875486-44882438 Glycine max
Glyma.03G253100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44875486-44880485 Glycine max
Glyma.03G253100 5.0kb downstream 5.0kb downstream 6953 true Chr03: 44880486-44887438 Glycine max
Glyma.03G253100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44882439-44887438 Glycine max
Glyma.03G253100 10.0kb upstream 10.0kb upstream 11953 true Chr03: 44870486-44882438 Glycine max
Glyma.03G253100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44870486-44880485 Glycine max
Glyma.03G253100 10.0kb downstream 10.0kb downstream 11953 true Chr03: 44880486-44892438 Glycine max
Glyma.03G253100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44882439-44892438 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122301536 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.5995 0.0 11.4497    
cufflinks 1.70273 0.0 8.60401   Low
cufflinks 2.21858 0.0 10.7289    
cufflinks 3.05703 0.0 12.7318   High
cufflinks 2.06428 0.0 10.0258    
cufflinks 3.55709 0.0 14.1363   High
cufflinks 1.9254 0.0 9.24834    
cufflinks 2.08709 0.0 9.82162    
cufflinks 2.69616 0.0 11.6183    
cufflinks 1.02        
cufflinks 0.425       Low
cufflinks 0.796        
cufflinks 1.503        
cufflinks 0.719        
cufflinks 0.548       Low
cufflinks 3.132       High
cufflinks 2.335        
cufflinks 0.937        
cufflinks 0.762        
cufflinks 3.737       High
cufflinks 0.723        
cufflinks 3.599       High
cufflinks 2.514        
cufflinks 0.749        
cufflinks 3.381       High
cufflinks 1.087        

0 Strain