Gene : Glyma.03G257600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10666//PTHR10666:SF138 - UBIQUITIN Genomic Order:  2576
Name:  ? Glyma.03G257600 Secondary Identifier:  ? PAC:30519271
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G257600 0.5kb upstream 0.5kb upstream 3465 true Chr03: 45208080-45211544 Glycine max
Glyma.03G257600 0.5kb upstream 0.5kb upstream 500 false Chr03: 45208080-45208579 Glycine max
Glyma.03G257600 0.5kb downstream 0.5kb downstream 3465 true Chr03: 45208580-45212044 Glycine max
Glyma.03G257600 0.5kb downstream 0.5kb downstream 500 false Chr03: 45211545-45212044 Glycine max
Glyma.03G257600 1.0kb upstream 1.0kb upstream 3965 true Chr03: 45207580-45211544 Glycine max
Glyma.03G257600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45207580-45208579 Glycine max
Glyma.03G257600 1.0kb downstream 1.0kb downstream 3965 true Chr03: 45208580-45212544 Glycine max
Glyma.03G257600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45211545-45212544 Glycine max
Glyma.03G257600 2.0kb upstream 2.0kb upstream 4965 true Chr03: 45206580-45211544 Glycine max
Glyma.03G257600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45206580-45208579 Glycine max
Glyma.03G257600 2.0kb downstream 2.0kb downstream 4965 true Chr03: 45208580-45213544 Glycine max
Glyma.03G257600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45211545-45213544 Glycine max
Glyma.03G257600 5.0kb upstream 5.0kb upstream 7965 true Chr03: 45203580-45211544 Glycine max
Glyma.03G257600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45203580-45208579 Glycine max
Glyma.03G257600 5.0kb downstream 5.0kb downstream 7965 true Chr03: 45208580-45216544 Glycine max
Glyma.03G257600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45211545-45216544 Glycine max
Glyma.03G257600 10.0kb upstream 10.0kb upstream 12965 true Chr03: 45198580-45211544 Glycine max
Glyma.03G257600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45198580-45208579 Glycine max
Glyma.03G257600 10.0kb downstream 10.0kb downstream 12965 true Chr03: 45208580-45221544 Glycine max
Glyma.03G257600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45211545-45221544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.4845 0.0 15.0295    
cufflinks 5.64605 0.0 15.4371    
cufflinks 6.26021 0.0 16.968    
cufflinks 4.7144 0.0 13.0641    
cufflinks 4.30097 0.0 12.0422   Low
cufflinks 9.71747 0.0 25.9524   High
cufflinks 8.08767 0.0 21.7177   High
cufflinks 4.55792 0.0 12.6754    
cufflinks 5.23436 0.0 14.3901    
cufflinks 12.947     High  
cufflinks 30.088     High High
cufflinks 8.557     High  
cufflinks 9.387     High  
cufflinks 7.217     High Low
cufflinks 18.581     High High
cufflinks 13.998     High  
cufflinks 15.803     High  
cufflinks 8.369     High  
cufflinks 8.662     High  
cufflinks 9.31     High  
cufflinks 18.539     High High
cufflinks 8.787     High  
cufflinks 10.18     High  
cufflinks 20.074     High High
cufflinks 11.171     High  
cufflinks 16.594     High  

0 Strain