Gene : Glyma.03G261000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  2610
Name:  ? Glyma.03G261000 Secondary Identifier:  ? PAC:30517740
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5173 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PYRUVDEHYD-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G261000 0.5kb upstream 0.5kb upstream 4609 true Chr03: 45464940-45469548 Glycine max
Glyma.03G261000 0.5kb upstream 0.5kb upstream 500 false Chr03: 45464940-45465439 Glycine max
Glyma.03G261000 0.5kb downstream 0.5kb downstream 4609 true Chr03: 45465440-45470048 Glycine max
Glyma.03G261000 0.5kb downstream 0.5kb downstream 500 false Chr03: 45469549-45470048 Glycine max
Glyma.03G261000 1.0kb upstream 1.0kb upstream 5109 true Chr03: 45464440-45469548 Glycine max
Glyma.03G261000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45464440-45465439 Glycine max
Glyma.03G261000 1.0kb downstream 1.0kb downstream 5109 true Chr03: 45465440-45470548 Glycine max
Glyma.03G261000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45469549-45470548 Glycine max
Glyma.03G261000 2.0kb upstream 2.0kb upstream 6109 true Chr03: 45463440-45469548 Glycine max
Glyma.03G261000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45463440-45465439 Glycine max
Glyma.03G261000 2.0kb downstream 2.0kb downstream 6109 true Chr03: 45465440-45471548 Glycine max
Glyma.03G261000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45469549-45471548 Glycine max
Glyma.03G261000 5.0kb upstream 5.0kb upstream 9109 true Chr03: 45460440-45469548 Glycine max
Glyma.03G261000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45460440-45465439 Glycine max
Glyma.03G261000 5.0kb downstream 5.0kb downstream 9109 true Chr03: 45465440-45474548 Glycine max
Glyma.03G261000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45469549-45474548 Glycine max
Glyma.03G261000 10.0kb upstream 10.0kb upstream 14109 true Chr03: 45455440-45469548 Glycine max
Glyma.03G261000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45455440-45465439 Glycine max
Glyma.03G261000 10.0kb downstream 10.0kb downstream 14109 true Chr03: 45465440-45479548 Glycine max
Glyma.03G261000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45469549-45479548 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309169 5265 Fabidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.05073 0.0 19.4587    
cufflinks 15.0688 0.0 40.2108   High
cufflinks 5.55601 0.0 15.6508   Low
cufflinks 8.85145 0.0 24.0334    
cufflinks 11.6751 0.0 31.3137    
cufflinks 14.3516 0.0 38.3102   High
cufflinks 10.077 0.0 27.1967    
cufflinks 8.99291 0.0 24.3905    
cufflinks 8.75884 0.0 23.7991    
cufflinks 6.55        
cufflinks 1.549       Low
cufflinks 4.482        
cufflinks 6.504        
cufflinks 8.621     High  
cufflinks 2.532       Low
cufflinks 7.112        
cufflinks 3.57        
cufflinks 12.322     High High
cufflinks 12.006     High High
cufflinks 4.558        
cufflinks 2.297       Low
cufflinks 6.024        
cufflinks 7.365        
cufflinks 2.909        
cufflinks 5.751        
cufflinks 2.973        

0 Strain