Gene : Glyma.03G212000 G. max Wm82.a2.v1
Defline:  (1 of 24) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2120
Name:  ? Glyma.03G212000 Secondary Identifier:  ? PAC:30518881
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G212000 0.5kb upstream 0.5kb upstream 3770 true Chr03: 41810840-41814609 Glycine max
Glyma.03G212000 0.5kb upstream 0.5kb upstream 500 false Chr03: 41814110-41814609 Glycine max
Glyma.03G212000 0.5kb downstream 0.5kb downstream 3770 true Chr03: 41810340-41814109 Glycine max
Glyma.03G212000 0.5kb downstream 0.5kb downstream 500 false Chr03: 41810340-41810839 Glycine max
Glyma.03G212000 1.0kb upstream 1.0kb upstream 4270 true Chr03: 41810840-41815109 Glycine max
Glyma.03G212000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41814110-41815109 Glycine max
Glyma.03G212000 1.0kb downstream 1.0kb downstream 4270 true Chr03: 41809840-41814109 Glycine max
Glyma.03G212000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41809840-41810839 Glycine max
Glyma.03G212000 2.0kb upstream 2.0kb upstream 5270 true Chr03: 41810840-41816109 Glycine max
Glyma.03G212000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41814110-41816109 Glycine max
Glyma.03G212000 2.0kb downstream 2.0kb downstream 5270 true Chr03: 41808840-41814109 Glycine max
Glyma.03G212000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41808840-41810839 Glycine max
Glyma.03G212000 5.0kb upstream 5.0kb upstream 8270 true Chr03: 41810840-41819109 Glycine max
Glyma.03G212000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41814110-41819109 Glycine max
Glyma.03G212000 5.0kb downstream 5.0kb downstream 8270 true Chr03: 41805840-41814109 Glycine max
Glyma.03G212000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41805840-41810839 Glycine max
Glyma.03G212000 10.0kb upstream 10.0kb upstream 13270 true Chr03: 41810840-41824109 Glycine max
Glyma.03G212000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41814110-41824109 Glycine max
Glyma.03G212000 10.0kb downstream 10.0kb downstream 13270 true Chr03: 41800840-41814109 Glycine max
Glyma.03G212000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41800840-41810839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122316154 5265 Fabidae View MSA
124073089 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.329328 0.0 1.26667    
cufflinks 0.359204 0.0 1.3766    
cufflinks 0.663276 0.0 2.47037    
cufflinks 0.700172 0.0 2.602    
cufflinks 0.974292 0.0 3.55996    
cufflinks 0.179364 0.0 0.70671 Low Low
cufflinks 0.0858801 0.0 0.348366 Low Low
cufflinks 1.33096 0.0 4.76721   High
cufflinks 1.17447 0.0 4.23979    
cufflinks 1.499       High
cufflinks 0.612        
cufflinks 0.459        
cufflinks 1.221       High
cufflinks 0.347        
cufflinks 0.024     Low Low
cufflinks 0.255        
cufflinks 0.628        
cufflinks 0.759        
cufflinks 0.096     Low Low
cufflinks 0.346        
cufflinks 0.687        
cufflinks 0.396        
cufflinks 0.209        
cufflinks 0.348        
cufflinks 0.326        
cufflinks 0.622        

0 Strain