Gene : Glyma.03G218100 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2181
Name:  ? Glyma.03G218100 Secondary Identifier:  ? PAC:30518787
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G218100 0.5kb upstream 0.5kb upstream 1133 true Chr03: 42176279-42177411 Glycine max
Glyma.03G218100 0.5kb upstream 0.5kb upstream 500 false Chr03: 42176912-42177411 Glycine max
Glyma.03G218100 0.5kb downstream 0.5kb downstream 1133 true Chr03: 42175779-42176911 Glycine max
Glyma.03G218100 0.5kb downstream 0.5kb downstream 500 false Chr03: 42175779-42176278 Glycine max
Glyma.03G218100 1.0kb upstream 1.0kb upstream 1633 true Chr03: 42176279-42177911 Glycine max
Glyma.03G218100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42176912-42177911 Glycine max
Glyma.03G218100 1.0kb downstream 1.0kb downstream 1633 true Chr03: 42175279-42176911 Glycine max
Glyma.03G218100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42175279-42176278 Glycine max
Glyma.03G218100 2.0kb upstream 2.0kb upstream 2633 true Chr03: 42176279-42178911 Glycine max
Glyma.03G218100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42176912-42178911 Glycine max
Glyma.03G218100 2.0kb downstream 2.0kb downstream 2633 true Chr03: 42174279-42176911 Glycine max
Glyma.03G218100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42174279-42176278 Glycine max
Glyma.03G218100 5.0kb upstream 5.0kb upstream 5633 true Chr03: 42176279-42181911 Glycine max
Glyma.03G218100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42176912-42181911 Glycine max
Glyma.03G218100 5.0kb downstream 5.0kb downstream 5633 true Chr03: 42171279-42176911 Glycine max
Glyma.03G218100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42171279-42176278 Glycine max
Glyma.03G218100 10.0kb upstream 10.0kb upstream 10633 true Chr03: 42176279-42186911 Glycine max
Glyma.03G218100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42176912-42186911 Glycine max
Glyma.03G218100 10.0kb downstream 10.0kb downstream 10633 true Chr03: 42166279-42176911 Glycine max
Glyma.03G218100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42166279-42176278 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314154 5265 Fabidae View MSA
124069714 5270 Rosid View MSA
123741153 5271 Pentapetalae View MSA
122791479 5272 Eudicot View MSA
122048852 5273 Angiosperm View MSA
121311139 5274 Embryophyte View MSA
123348476 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0459078 0.0 0.207619 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.962829 0.0 3.67476   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0374318 0.0 0.171968 Low  
cufflinks 0.256786 0.0 1.03085 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.212        
cufflinks 0.346        
cufflinks 0.025     Low  
cufflinks 0.029     Low  
cufflinks 0.061        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.293     High High
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.356        

0 Strain