Gene : Glyma.19G115900 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  1159
Name:  ? Glyma.19G115900 Secondary Identifier:  ? PAC:30512453
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6121 Glycine max pathologic  
Gmax PWY-6613 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G115900 0.5kb upstream 0.5kb upstream 3253 true Chr19: 37130728-37133980 Glycine max
Glyma.19G115900 0.5kb upstream 0.5kb upstream 500 false Chr19: 37133481-37133980 Glycine max
Glyma.19G115900 0.5kb downstream 0.5kb downstream 3253 true Chr19: 37130228-37133480 Glycine max
Glyma.19G115900 0.5kb downstream 0.5kb downstream 500 false Chr19: 37130228-37130727 Glycine max
Glyma.19G115900 1.0kb upstream 1.0kb upstream 3753 true Chr19: 37130728-37134480 Glycine max
Glyma.19G115900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37133481-37134480 Glycine max
Glyma.19G115900 1.0kb downstream 1.0kb downstream 3753 true Chr19: 37129728-37133480 Glycine max
Glyma.19G115900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37129728-37130727 Glycine max
Glyma.19G115900 2.0kb upstream 2.0kb upstream 4753 true Chr19: 37130728-37135480 Glycine max
Glyma.19G115900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37133481-37135480 Glycine max
Glyma.19G115900 2.0kb downstream 2.0kb downstream 4753 true Chr19: 37128728-37133480 Glycine max
Glyma.19G115900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37128728-37130727 Glycine max
Glyma.19G115900 5.0kb upstream 5.0kb upstream 7753 true Chr19: 37130728-37138480 Glycine max
Glyma.19G115900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37133481-37138480 Glycine max
Glyma.19G115900 5.0kb downstream 5.0kb downstream 7753 true Chr19: 37125728-37133480 Glycine max
Glyma.19G115900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37125728-37130727 Glycine max
Glyma.19G115900 10.0kb upstream 10.0kb upstream 12753 true Chr19: 37130728-37143480 Glycine max
Glyma.19G115900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37133481-37143480 Glycine max
Glyma.19G115900 10.0kb downstream 10.0kb downstream 12753 true Chr19: 37120728-37133480 Glycine max
Glyma.19G115900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37120728-37130727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306481 5265 Fabidae View MSA
124065104 5270 Rosid View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0481 0.0 27.4366    
cufflinks 7.62999 0.0 21.2902    
cufflinks 5.28253 0.0 15.3164    
cufflinks 10.7624 0.0 29.2317    
cufflinks 21.5037 0.0 57.3844 High  
cufflinks 9.55762 0.0 26.1866    
cufflinks 7.36555 0.0 20.6382    
cufflinks 8.89315 0.0 24.4622    
cufflinks 84.9003 0.0 254.514 High High
cufflinks 4.965        
cufflinks 2.615        
cufflinks 6.138        
cufflinks 8.778     High  
cufflinks 8.581     High  
cufflinks 49.031     High High
cufflinks 3.312        
cufflinks 3.0        
cufflinks 6.486        
cufflinks 5.75        
cufflinks 3.025        
cufflinks 3.088        
cufflinks 3.542        
cufflinks 4.51        
cufflinks 3.882        
cufflinks 3.432        
cufflinks 4.543        

0 Strain