Gene : Glyma.03G225000 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12565:SF178 - TRANSCRIPTION FACTOR PIF3 Genomic Order:  2250
Name:  ? Glyma.03G225000 Secondary Identifier:  ? PAC:30516928
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G225000 0.5kb upstream 0.5kb upstream 3327 true Chr03: 42725877-42729203 Glycine max
Glyma.03G225000 0.5kb upstream 0.5kb upstream 500 false Chr03: 42725877-42726376 Glycine max
Glyma.03G225000 0.5kb downstream 0.5kb downstream 3327 true Chr03: 42726377-42729703 Glycine max
Glyma.03G225000 0.5kb downstream 0.5kb downstream 500 false Chr03: 42729204-42729703 Glycine max
Glyma.03G225000 1.0kb upstream 1.0kb upstream 3827 true Chr03: 42725377-42729203 Glycine max
Glyma.03G225000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42725377-42726376 Glycine max
Glyma.03G225000 1.0kb downstream 1.0kb downstream 3827 true Chr03: 42726377-42730203 Glycine max
Glyma.03G225000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42729204-42730203 Glycine max
Glyma.03G225000 2.0kb upstream 2.0kb upstream 4827 true Chr03: 42724377-42729203 Glycine max
Glyma.03G225000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42724377-42726376 Glycine max
Glyma.03G225000 2.0kb downstream 2.0kb downstream 4827 true Chr03: 42726377-42731203 Glycine max
Glyma.03G225000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42729204-42731203 Glycine max
Glyma.03G225000 5.0kb upstream 5.0kb upstream 7827 true Chr03: 42721377-42729203 Glycine max
Glyma.03G225000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42721377-42726376 Glycine max
Glyma.03G225000 5.0kb downstream 5.0kb downstream 7827 true Chr03: 42726377-42734203 Glycine max
Glyma.03G225000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42729204-42734203 Glycine max
Glyma.03G225000 10.0kb upstream 10.0kb upstream 12827 true Chr03: 42716377-42729203 Glycine max
Glyma.03G225000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42716377-42726376 Glycine max
Glyma.03G225000 10.0kb downstream 10.0kb downstream 12827 true Chr03: 42726377-42739203 Glycine max
Glyma.03G225000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42729204-42739203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298320 5265 Fabidae View MSA
124075094 5270 Rosid View MSA
123752650 5271 Pentapetalae View MSA
122774700 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.59898 0.0 23.2948   High
cufflinks 4.2627 0.0 12.2931    
cufflinks 3.25543 0.0 9.7043    
cufflinks 5.36301 0.0 15.047    
cufflinks 0.277042 0.0 1.04389    
cufflinks 0.0570492 0.0 0.229021 Low Low
cufflinks 0.114984 0.0 0.449735 Low  
cufflinks 1.14084 0.0 3.90479    
cufflinks 0.0501613 0.0 0.202294 Low Low
cufflinks 1.252        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.112     High High
cufflinks 0.079     Low  
cufflinks 0.168        
cufflinks 0.013     Low Low
cufflinks 1.757        
cufflinks 0.031     Low Low
cufflinks 7.841     High High
cufflinks 0.459        
cufflinks 1.316        
cufflinks 0.009     Low Low
cufflinks 1.358        
cufflinks 0.76        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.908        
cufflinks 0.011     Low Low

0 Strain